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Job Description | P67143 | Confidence | 3.95% | Date | Thu Jan 5 12:10:30 GMT 2012 |
Rank | 12 | Aligned Residues | 112 |
% Identity | 11% | Template | d1iwga8 |
SCOP info | Multidrug efflux transporter AcrB transmembrane domain
| Multidrug efflux transporter AcrB transmembrane domain
| Multidrug efflux transporter AcrB transmembrane domain
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Resolution | 3.50 |
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41 | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
V | R | E | L | L | I | A | L | L | V | M | L | V | F | L | F | A | G | E | K | I | L | A | F | L | S | L | R | A | E | T | V | S | I | S | G | G | I | I | L | F | L | I | A | I | K | M | . |
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I | F | P | S | A | S | G | N | S | S | G | L | P | A | G | E | E | P | F | I | V | P | L | A | I | P |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
W | S | I | P | F | S | V | M | L | V | V | P | L | G | V | I | G | A | L | L | A | A | T | F | R | G | L | T | N | D | V | Y | F | Q | V | G | L | L | T | T | I | G | L | S | A | K | N | A | I | L | I | V | E | F | A | K | D | L | M | D | K | E | G | K | G | L | I | E | A | T | L | D | A | V | R | M | R | L | R | P |
Template Known Secondary structure |   |
S | S |  |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
895 | . | . | . | . | 900 | . | . | . | . | . | . | . | . | . | 910 | . | . | . | . | . | . | . | . | . | 920 | . | . | . | . | . | . | . | . | . | 930 | . | . | . | . | . | . | . | . | . | 940 | . | . | . | . | . | . | . | . | . | 950 | . | . | . | . | . | . | . | . | . | 960 | . | . | . | . | . | . | . | . | . | 970 | . | . | . | . |
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114 | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | V | A | G | P | T | I | L | A | T | L | M | L | L | S | H | Q | Y | P | N | Q | M | G | H | L | V | I | A | L | L | L | A | W | G | G | T | F | V | I |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
I | L | M | T | S | L | A | F | I | L | G | V | M | P | L | V | I | S | T | G | A | G | S | G | A | Q | N | A | V | G | T | G | V | M | G | G | M | V | T |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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975 | . | . | . | . | 980 | . | . | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | . | . | . | . | . | . | . | 1010 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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