 |
Job Description | Q46901 | Confidence | 3.04% | Date | Thu Jan 5 12:35:40 GMT 2012 |
Rank | 60 | Aligned Residues | 42 |
% Identity | 24% | Template | c3s6n2_ |
PDB info |
PDB header:splicing | Chain: 2: PDB Molecule:survival of motor neuron protein-interacting protein 1; | PDB Fragment:gemin2-binding domain;
PDBTitle: crystal structure of the gemin2-binding domain of smn, gemin2 in2 complex with smd1/d2/f/e/g from human
|
Resolution | 2.50 Å |
|
  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | N | L | Q | S | L | Y | C | S | R | D | Q | W | R | L | S | L | P | R | D | D | M | E | L | A | A | L | A | L | L | V | C | I | G | Q | I | I | A | P | A | K | D |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |
|
|   |
|
|
|
|
|
|   |   |   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|
|
|   |
|
|
|   |
|
|
|
|   |
|
Template Sequence |   |
L | I | R | Q | L | A | R | R | C | S | E | V | R | L | L | V | D | S | K | D | D | E | R | V | P | A | L | N | L | L | I | C | L | V | S | R | Y | F | D | Q | R | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | G | G | G |
|
| S | T | T |
| T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
233 | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|