 |
Job Description | Q46901 | Confidence | 2.36% | Date | Thu Jan 5 12:35:40 GMT 2012 |
Rank | 95 | Aligned Residues | 55 |
% Identity | 13% | Template | c2ys8A_ |
PDB info |
PDB header:protein binding | Chain: A: PDB Molecule:rab-related gtp-binding protein rabj; |
PDBTitle: solution structure of the dnaj-like domain from human ras-2 associated protein rap1
|
Resolution | UNK |
|
 |
  |   |
442 | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | A | D | E | V | I | A | D | L | R | D | K | L | H | Q | L | C | E | M | L | F | N | Q | S | V | A | P | Y | A | H | H | P | K | L | I | S | T | L | A | L | A | R | A | T | L | Y | K | H | L | R | E | L | K | P | Q | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |   |
|
|   |
|
|
|   |
|   |   |   |   |
|
|
|
|   | . |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|
|   |
|
|   |
|   |   |
|   |   |   |   |   |   |
Template Sequence |   |
K | P | G | A | S | R | D | E | V | N | K | A | Y | R | K | L | A | V | L | L | H | P | D | K | C | . |
V | A | P | G | S | E | D | A | F | K | A | V | V | N | A | R | T | A | L | L | K | N | I | K | S | G | P | S | S | G |
Template Known Secondary structure |   |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | T |
| . |
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |
|
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
. | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|