Return to main results Retrieve Phyre Job Id

Job DescriptionQ46901
Confidence5.76%DateThu Jan 5 12:35:40 GMT 2012
Rank20Aligned Residues76
% Identity9%Templatec2wdtA_
PDB info PDB header:hydrolase/protein bindingChain: A: PDB Molecule:ubiquitin carboxyl-terminal hydrolase l3; PDBTitle: crystal structure of plasmodium falciparum uchl3 in complex2 with the suicide inhibitor ubvme
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   76...80.........90.........100.........110.........120.........130.........140.........150.....
Predicted Secondary structure 











































Query SS confidence 















































































Query Sequence  TEDEFQQLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQA
Query Conservation      
  

     

 

    

 
   
       
  
    
 


   
        
    

  
   
   
Alig confidence 
























..



































....












Template Conservation 

 


     


    
 

 

..
 
 
  

 

 






     
 
 



 

....


 



 
 
 
Template Sequence  NPDSLYLYSCKLGQSKLKFVDIYGF. . NNDLLDMIPQPVQAVIFLYPVNFDNVWFIKQYIPNS. . . . CGTIALLHLYGNL
Template Known Secondary structure 
T

S


S..STTS
S





TTS





STT
....S
Template Predicted Secondary structure 







..















....

Template SS confidence 















































































   13......20.........30....... ..40.........50.........60.........70... ......80......
 
   156.
Predicted Secondary structure 

Query SS confidence 

Query Sequence  PG
Query Conservation    
Alig confidence 

Template Conservation    
Template Sequence  RN
Template Known Secondary structure  TT
Template Predicted Secondary structure 

Template SS confidence 

   105.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions