|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | |
|
. | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
|
|
. | . | 70 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . | . |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  | . | . | . |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | I | K | V | F | T | S | T | G | E | L | T | T | L | G | R | E | L | G | K | G | G | E | . |
. |
G | A | V | Y | D | I | E | E | F | V | D | S | V | A | K | I | Y | H | T | P | P | P | A | L | K | Q | D | K | L | A | F | M | A | A | T | A | D | A | Q | L | L | . |
. |
. |
N | Y | V | A | W | P | Q | A | T | L | H |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|   | . | . |
|   |
|
|   |
|   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |
|   |
|   |
| . |
|
|
|
|
|
|   |   |   |   |
|
|   |   |   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |
|   |
Template Sequence |   |
K | C | K | V | M | A | S | K | K | K | P | L | W | L | E | F | K | C | A | D | P | T | A | L | S | N | E | T | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | I | I | F | K | H | G | . |
D | D | L | R | Q | D | M | L | I | L | Q | I | L | R | I | M | E | S | I | W | E | T | E | S | L | D | L | C | L | L | P | Y | G |
Template Known Secondary structure |   |
G |
|  |  |
| S | S | T | T |
|
|  |  |  |  |  |  |  | S |
| T | T |
| S |
|
|
|
|  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  | S | . | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|
|
|
|
|
|
Template Predicted Secondary structure |   |
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | 830 | . | . | . | . | . | |
. | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . | . | . | . | . | . | . | 860 | . | . | . | . | . | . | . | . |
  |
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | |
|
. | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
Query Sequence |   |
G | G | R | G | G | K | V | I | G | F | M | M | P | K | V | S | G | K | E | P | I | H | M | I | Y | S | P | A | H | R | R | Q | S | Y | P | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
C | A | W | D | F | L | L | Y | V | A | R | N | I | A | S | S | F | A | T | V | H | E | H | G | H | V | . |
. |
V | G | D | V | N |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|
|   |   |
|
|
| . | . |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |   |   |
|
|
|
|   |
|   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|
|   |   |
|
|
|
|
|
|
|
|
|
Template Sequence |   |
C | I | S | T | G | D | K | I | G | M | I | E | I | V | K | D | A | T | T | I | A | K | I | Q | Q | S | T | V | G | N | T | G | A | F | K | D | E | V | L | S | H | W | L | K | E | K | C | P | I | E | E | K | F | Q | A | A | V | E | R | F | V | Y | S | C | A | G | Y | C | V | A | T | F | V | L | G | I | G | D | R | H |
Template Known Secondary structure |   |
 |  |  |  |  | T | T |  |  |  |  |  |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  | S |
| S | S | S |
|
|
| S | S |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
869 | 870 | . | . | . | . | . | . | . | . | . | 880 | . | . | . | . | . | . | . | . | . | 890 | . | . | . | . | . | . | . | . | . | 900 | . | . | . | . | . | . | . | . | . | 910 | . | . | . | . | . | . | . | . | . | 920 | . | . | . | . | . | . | . | . | . | 930 | . | . | . | . | . | . | . | . | . | 940 | . | . | . | . | . | . | . | . |
  |
  |   |
146 | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | N | S | F | M | V | G | R | D | S | K | V | V | L | I | D | S | D | S | F | Q | I | N | A | N | G | T | L | H | L | C | E | V | G | V | S | H | F | T | P | P | E | L | Q | T | L | P | S | F | V | G | F | E | R | T | E | N | H | D | N | F | G | L | A | L | L |
Query Conservation |   |
|   |
|
|
|
|   |   |   |
|   |
|
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |
|
|
|   |   |
|
|
|   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|   |   |   |
|   |   |   |
|
|
|
|
|   |
|   |   |
|   |   | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |
Template Sequence |   |
N | D | N | I | M | I | S | E | T | G | N | L | F | H | I | D | F | G | H | I | N | K | E | R | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | F | V | L | T | P | D | F | L | F | V | M | G | T | S | G | K | K | T | S | L | H | F | Q | K | F | Q | D | V | C | V |
Template Known Secondary structure |   |
G | G | G |  |  |  |  | T | T |
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | S | S |
|
|
|  |  |  |  |  |  | T | T |
|
| S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
949 | 950 | . | . | . | . | . | . | . | . | . | 960 | . | . | . | . | . | . | . | . | . | 970 | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 980 | . | . | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | . | . |
  |