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Job DescriptionP76393
Confidence100.00%DateThu Jan 5 12:22:31 GMT 2012
Rank14Aligned Residues245
% Identity13%Templatec3soaA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase type ii subunit PDBTitle: full-length human camkii
Resolution3.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TTLGRELGKGGEGAVYDIEE. FVDSVAKIYHTPPPAL. . . . . KQDKLAFMAATADAQLLNYVAWPQATLHGGRGGKVIGF
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Template Sequence  YQLFEELGKGSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRL. . . . . . . HDSISEEGHHYL
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Query Sequence  MMPKVSGKEPIHMIYSPAHRRQSYPHCAWDFLLYVARNIASSFATVHEHGHVVGDVNQNSFMVGRDSK. . . VVLIDSDSF
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Template Sequence  IFDLVTGGELFEDIVARE. . . . . . . YYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA
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   88.90.........100..... ....110.........120.........130.........140.........150.........160
 
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Query Sequence  QINANGTLHLCEVGVSHFTPPELQTLPSFVGFERTENHDNFGLALLIFHVLFGGRHPYSGVPLISDAGNALETDITHFRY
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Template Sequence  IEVEGEQQAWFG. . . . FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILL. VGYPPFWDEDQHRLYQQIKAG. . . . . . .
Template Known Secondary structure  B


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   246...250.........260.........270.........280.........290........
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Query Sequence  AYASDNQRRGLKPPPRSIPLSMLPSDVEAMFQQAFTESGVATGRPTAKAWVAA
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Template Sequence  . . . . . . . . . . . AYDFPSPEWDTVTPEAKDLINKMLTIN. . PSKRITAAEALKH
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TTTTTTS
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   229230.........240.........250..... ....260........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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