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Job DescriptionP76393
Confidence99.09%DateThu Jan 5 12:22:31 GMT 2012
Rank274Aligned Residues128
% Identity16%Templatec3ovcA_
PDB info PDB header:transferase/antibioticChain: A: PDB Molecule:hygromycin-b 4-o-kinase; PDBTitle: crystal structure of aminoglycoside phosphotransferase aph(4)-ia
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.... .....40.........50.........60.........70.........80.........90......
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Query Sequence  GRELGKGGEGAVYDIEE. FVDSVAKIYHTPPPALKQDKLAFMAATADAQLLNYVAWPQATLHGGRGGKVIGFMMPKVSGK
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Template Sequence  LXQLSEGEESRAFSFDVGGRGYVLRVNSCADG. . FYKDRYVYRHFASAA. . . . LPIPEVLDIGEFSESLTYCISRRAQGV
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   25....30.........40.........50...... ...60.........70. ........80.........90........
 
   97..100.........110.........120.........130......
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Query Sequence  EPIHMIYSPAHRRQSYPHCAWDFLLYVARNIASSFATVHE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  TL. . . . . . . . . . . . . . QDLPETELPAVLQPVAEAXDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQT
Template Known Secondary structure  T..............TTS
GGGSGGG


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B

TTSBSSGGG
TTT

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   99100 .........110.........120.........130.........140.........150.........160....
 
   137..140.........150.........160.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . HGHVVGDVNQNSFMVGRDSKVVLIDSDSF
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Template Sequence  VXDDTVSASVAQALDELXLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEA
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TTTGGG





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   165....170.........180.........190.........200.........210.........220
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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