Job Description P76393 Confidence 99.96% Date Thu Jan 5 12:22:31 GMT 2012 Rank 232 Aligned Residues 260 % Identity 11% Template c3kmuA_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:integrin-linked kinase; PDBTitle: crystal structure of the ilk/alpha-parvin core complex (apo) Resolution 1.80 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.
Predicted Secondary structure																													.																																														.
Query SS confidence																													.																																														.
Query Sequence		F	T	S	T	G	E	L	T	T	L	G	R	E	L	G	K	G	G	E	G	A	V	Y	D	I	E	E	.	F	V	D	S	V	A	K	I	Y	H	T	P	P	P	A	L	K	Q	D	K	L	A	F	M	A	A	T	A	D	A	Q	L	L	N	Y	V	A	W	P	Q	A	T	L	H	G	.	G	R	G	G	K	V
Query Conservation																													.																																														.
Alig confidence																													.													.																																	.
Template Conservation																																										.
Template Sequence		S	G	I	D	F	K	Q	L	N	F	L	T	K	L	N	E	N	H	S	G	E	L	W	K	G	R	W	Q	G	N	D	I	V	V	K	V	L	K	V	R	.	D	W	S	T	R	K	S	R	D	F	N	E	E	C	P	R	L	R	I	F	S	H	P	N	V	L	P	V	L	G	A	C	Q	S	P	P	A	P	H
Template Known Secondary structure						G	G	G											T	T									T	T											T	.	T													G	G	G	G				S		T	T										T	T	T	S	S	S
Template Predicted Secondary structure																																										.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		I	G	F	M	M	P	K	V	S	G	K	E	P	I	H	M	I	Y	S	P	A	H	R	R	Q	S	Y	P	H	C	A	W	D	F	L	L	Y	V	A	R	N	I	A	S	S	F	A	T	V	H	E	H	G	.	.	H	V	V	G	D	V	N	Q	N	S	F	M	V	G	R	D	S	K	V	V	L	I	D	S	D
Query Conservation																																																							.	.
Alig confidence																									.	.	.	.	.																										.	.
Template Conservation																									.	.	.	.	.
Template Sequence		P	T	L	I	T	H	W	X	P	Y	G	S	L	Y	N	V	L	H	E	G	T	N	F	.	.	.	.	.	V	V	D	Q	S	Q	A	V	K	F	A	L	D	X	A	R	G	X	A	F	L	H	T	L	E	P	L	I	P	R	H	A	L	N	S	R	S	V	X	I	D	E	D	X	T	A	R	I	S	X	A	D
Template Known Secondary structure										T	T		B							S		S	S		.	.	.	.	.																						T	T	S	S	S			T	T				S	G	G	G					T	T	S						G	G	G
Template Predicted Secondary structure																									.	.	.	.	.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.						.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	Q	I	N	A	N	G	T	L	H	L	C	E	V	G	V	S	H	F	T	P	P	E	L	Q	T	L	P	S	F	V	G	F	E	R	T	E	N	H	D	N	F	G	L	A	L	L	I	F	H	V	L	F	G	G	R	H	P	Y	S	G	V	P	L	I	S	D	A	G	N	A	L	E	T	D	I	T	H	F
Query Conservation
Alig confidence					.	.	.	.																								.	.																						.																										.
Template Conservation					.	.	.	.																								.	.																						.																										.
Template Sequence		V	K	F	.	.	.	.	S	F	Q	S	P	G	R	X	Y	A	P	A	W	V	A	P	E	A	L	Q	K	K	P	.	.	E	D	T	N	R	R	S	A	D	X	W	S	F	A	V	L	L	W	E	L	V	.	T	R	E	V	P	F	A	D	L	S	N	X	E	I	G	X	K	V	A	L	E	G	L	R	P	.
Template Known Secondary structure		S			.	.	.	.	T	T	S		T	T			S		G	G	G	S							S		G	.	.	G	G	S																			.			S		T	T	T	T	S												S					.
Template Predicted Secondary structure					.	.	.	.																								.	.																						.																										.
Template SS confidence
		340	.	.					.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.			.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.		.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	A	Y	A	S	D	N	Q	R	R	G	L	K	P	P	P	R	S	I	P	L	S	M	L	P	S	D	V	E	A	M	F	Q	Q	A	F	T	E	S	G	V	A	T	G	R	P	T	A	K	A	W	V	A	A	L	D	S	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	P	P	G	I	S	P	H	V	S	K	L	X	K	I	C	X	N	E	D	.	.	P	A	K	R	P	K	F	D	X	I	V	P	I	L	E	K	X
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T													T		S	S	.	.	G	G	G	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template SS confidence
																					412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.			.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions