Job Description P76393 Confidence 60.67% Date Thu Jan 5 12:22:31 GMT 2012 Rank 305 Aligned Residues 73 % Identity 18% Template c3k3pA_ PDB info PDB header:ligase Chain: A: PDB Molecule:d-alanine--d-alanine ligase; PDBTitle: crystal structure of the apo form of d-alanine:d-alanine ligase (ddl)2 from streptococcus mutans Resolution 2.23 Å

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		84	.	.	.	.	.	90	.	.	.	.	.											.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	I	G	F	M	M	P	K	V	S	G	.	.	.	.	.	.	.	.	.	.	K	E	P	I	H	M	I	Y	S	P	A	H	R	R	Q	S	Y	P	H	C	A	W	D	F	L	L	Y	V	A	R	N	I	A	S	S	F	A	T	V	H	E	H	G	H	V	V	G	D	V	N	Q	N	S	F	M	V	G	R
Query Conservation														.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.
Template Sequence		D	S	R	V	L	I	E	Q	G	V	D	A	R	E	I	E	V	G	I	L	G	N	T	D	V	K	T	T	L	P	G	E	I	V	T	M	A	I	P	A	E	I	D	P	V	I	V	E	K	M	R	D	Y	A	A	T	A	F	R	T	L	G	C	C	G	L	S	R	C	D	F	F	.	.	.	.	.	L	T	E
Template Known Secondary structure			S										S										S	S	S														S	S																						T	T											.	.	.	.	.			T
Template Predicted Secondary structure																																																																										.	.	.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.						.	.	.
		154	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	K	V	V	L	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	K	V	Y	L	N	E
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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