Job Description P76393 Confidence 100.00% Date Thu Jan 5 12:22:31 GMT 2012 Rank 142 Aligned Residues 235 % Identity 11% Template c3i6wB_ PDB info PDB header:transferase Chain: B: PDB Molecule:serine/threonine-protein kinase chk2; PDBTitle: structure and activation mechanism of the chk2 dna-damage checkpoint2 kinase Resolution 3.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		T	T	L	G	R	E	L	G	K	G	G	E	G	A	V	Y	D	I	E	E	.	.	.	F	V	D	S	V	A	K	I	Y	H	T	P	P	P	A	L	K	Q	D	K	L	A	F	M	A	A	T	A	D	A	Q	L	L	N	Y	V	A	W	P	Q	A	T	L	H	G	G	R	G	G	K	V	I	G	F	M	M	P
Query Conservation																						.	.	.
Alig confidence																						.	.	.												.	.	.																						.	.	.	.	.	.	.									.
Template Conservation																																				.	.	.																						.	.	.	.	.	.	.									.
Template Sequence		A	L	R	D	E	Y	I	M	S	K	T	L	G	E	V	K	L	A	F	E	R	K	T	C	K	K	V	A	I	R	I	I	S	K	.	.	.	L	N	V	E	T	E	I	E	I	L	K	K	L	N	H	P	C	I	I	K	I	.	.	.	.	.	.	.	K	N	F	F	D	A	E	D	.	Y	Y	I	V	L	E
Template Known Secondary structure																						T	T	T												.	.	.			T	T												T	T	B				.	.	.	.	.	.	.						S	S	S	.
Template Predicted Secondary structure																																				.	.	.																						.	.	.	.	.	.	.									.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.				.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.								270	.	.	.	.	.	.	.		.	.	280	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.
Query SS confidence																																																															.	.	.
Query Sequence		K	V	S	G	K	E	P	I	H	M	I	Y	S	P	A	H	R	R	Q	S	Y	P	H	C	A	W	D	F	L	L	Y	V	A	R	N	I	A	S	S	F	A	T	V	H	E	H	G	H	V	V	G	D	V	N	Q	N	S	F	M	V	G	.	.	.	R	D	S	K	V	V	L	I	D	S	D	S	F	Q	I	N
Query Conservation																																																															.	.	.
Alig confidence																	.	.	.	.	.	.	.																																								.	.	.
Template Conservation																	.	.	.	.	.	.	.
Template Sequence		L	M	E	G	G	E	L	F	D	K	V	V	G	N	K	.	.	.	.	.	.	.	R	L	K	E	A	T	C	K	L	Y	F	Y	Q	M	L	L	A	V	Q	Y	L	H	E	N	G	I	I	H	R	D	L	K	P	E	N	V	L	L	S	S	Q	E	E	D	C	L	I	K	I	T	D	F	G	H	S	K	I	L
Template Known Secondary structure				T	T		B							S	S		.	.	.	.	.	.	.																								T	T								T	T	T				S	S	S	S	S	S									S	S	S			T
Template Predicted Secondary structure																	.	.	.	.	.	.	.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.								.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	G	T	L	H	L	C	E	V	G	V	S	H	F	T	P	P	E	L	Q	T	L	P	S	F	V	G	F	E	R	T	E	N	H	D	N	F	G	L	A	L	L	I	F	H	V	L	F	G	G	R	H	P	Y	S	G	V	P	L	I	S	D	A	G	N	A	L	E	T	D	I	T	H	F	R	Y	A	Y	A
Query Conservation
Alig confidence						.	.	.	.	.											.	.	.	.	.	.																								.																						.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.											.	.	.	.	.	.																								.																						.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	T	S	.	.	.	.	.	L	M	R	P	T	Y	L	A	P	E	.	.	.	.	.	.	V	L	V	A	G	Y	N	R	A	V	D	C	W	S	L	G	V	I	L	F	I	C	L	.	S	G	Y	P	P	F	S	E	H	R	T	Q	V	S	L	K	D	Q	I	T	S	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T				.	.	.	.	.	T	T							S	T	.	.	.	.	.	.	T	T					S	T																.		S	S		S					S	S	S	S									.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.	.	.	.	.											.	.	.	.	.	.																								.																						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		376	.	.	.						380	.	.	.	.	.	.	.	.	.							390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.		.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	N	Q	R	R	G	L	K	P	P	P	R	S	I	P	L	S	M	L	P	S	D	V	E	A	M	F	Q	Q	A	F	T	E	S	G	V	A	T	G	R	P	T	A	K	A	W	V	A	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.																													.	.
Template Conservation		.	.	.	.	.	.	.																													.	.
Template Sequence		.	.	.	.	.	.	.	G	K	Y	N	F	I	P	E	V	W	A	E	V	S	E	K	A	L	D	L	V	K	K	L	L	V	V	D	.	.	P	K	A	R	F	T	T	E	E	A	L	R	H
Template Known Secondary structure		.	.	.	.	.	.	.	T										T	T	S												S		S	S	.	.	T	T	T	S								T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.																													.	.
Template SS confidence
									443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470			.	.	.	.	.	.	.	.	.	480	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions