Job Description P76393 Confidence 99.95% Date Thu Jan 5 12:22:31 GMT 2012 Rank 246 Aligned Residues 256 % Identity 11% Template c3gc0A_ PDB info PDB header:transferase Chain: A: PDB Molecule:kinase, cmgc cdk; PDBTitle: structure of the cmgc cdk kinase from giardia lamblia in complex with2 amp Resolution 2.00 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence		T	G	E	L	T	T	L	G	R	E	L	G	K	G	G	E	G	A	V	Y	D	I	E	E	.	.	.	F	V	D	S	V	A	K	I	Y	H	T	P	P	P	A	L	K	Q	D	K	L	A	F	M	A	A	T	A	D	A	Q	L	L	N	Y	V	A	W	P	Q	A	T	L	H	G	G	R	G	G	K	V	I	G
Query Conservation																										.	.	.
Alig confidence																										.	.	.													.	.																						.	.	.	.	.	.	.
Template Conservation																																									.	.																						.	.	.	.	.	.	.
Template Sequence		S	I	D	R	Y	R	R	I	T	K	L	G	E	G	T	Y	G	E	V	Y	K	A	I	D	T	V	T	N	E	T	V	A	I	K	R	I	R	L	E	.	.	H	T	A	I	R	E	V	S	L	L	K	E	L	Q	H	R	N	I	I	E	L	.	.	.	.	.	.	.	K	S	V	I	H	H	N	H	R	L	H
Template Known Secondary structure			G	G	G											S	S	S								T	T	T	T												.	.										G	G	G			B	T	T	B				.	.	.	.	.	.	.							T	T
Template Predicted Secondary structure																																									.	.																						.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70								.	.	.	.	.	.	.	.	.	80	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		F	M	M	P	K	V	S	G	K	E	P	I	H	M	I	Y	S	P	A	H	R	R	Q	S	Y	P	H	C	A	W	D	F	L	L	Y	V	A	R	N	I	A	S	S	F	A	T	V	H	E	H	G	H	V	V	G	D	V	N	Q	N	S	F	M	V	.	G	R	D	S	K	V	V	L	I	D	S	D	S	F	Q
Query Conservation																																																																		.
Alig confidence																					.	.	.	.	.	.	.	.																																						.													.	.	.
Template Conservation																					.	.	.	.	.	.	.	.																																																			.	.	.
Template Sequence		L	I	F	E	Y	A	E	N	D	L	K	K	Y	M	D	K	N	P	D	.	.	.	.	.	.	.	.	V	S	M	R	V	I	K	S	F	L	Y	Q	L	I	N	G	V	N	F	C	H	S	R	R	C	L	H	R	D	L	K	P	Q	N	L	L	L	S	V	E	T	P	V	L	K	I	G	D	F	G	.	.	.
Template Known Secondary structure								S											T	T	.	.	.	.	.	.	.	.																							T	T				S				G	G	G															T	T	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.																																																			.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.									.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	A	N	G	T	L	H	L	C	E	V	G	V	S	H	F	T	P	P	E	L	Q	T	L	P	S	F	V	G	F	E	R	T	E	N	H	D	N	F	G	L	A	L	L	I	F	H	V	L	F	G	G	R	H	P	Y	S	G	V	P	L	I	S	D	A	G	N	A	L	E	T	D	I	T	H	F	R	Y	A
Query Conservation
Alig confidence		.	.	.	.	.																		.	.	.	.																									.
Template Conservation		.	.	.	.	.																		.	.	.	.																									.
Template Sequence		.	.	.	.	.	L	A	R	A	F	E	I	I	T	L	W	Y	R	P	P	E	I	.	.	.	.	L	L	G	S	R	H	Y	S	T	S	V	D	I	W	S	I	A	C	I	W	A	E	M	L	.	M	K	T	P	L	F	P	G	D	S	E	I	D	Q	L	F	K	I	F	E	V	L	G	L	P	D	D	T	T
Template Known Secondary structure		.	.	.	.	.							G	G	G	G	G	G						.	.	.	.		T	T		S				T																.		S	S		S	S			S	S																	T	T	T
Template Predicted Secondary structure		.	.	.	.	.																		.	.	.	.																									.
Template SS confidence
							162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.					.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.									.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.
Query Sequence		Y	A	S	D	N	Q	R	R	G	L	K	P	P	P	R	S	I	P	.	.	.	.	.	.	.	.	L	S	M	L	P	S	D	V	E	A	M	F	Q	Q	A	F	T	E	S	G	V	A	T	G	R	P	T	A	K	A	W	V	A	A
Query Conservation																				.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.																				.	.
Template Conservation																																															.	.
Template Sequence		W	P	G	V	T	A	L	P	D	W	K	Q	S	F	P	K	F	R	G	K	T	L	K	R	V	L	G	A	L	L	D	D	E	G	L	D	L	L	T	A	M	L	E	M	D	.	.	P	V	K	R	I	S	A	K	N	A	L	E	H
Template Known Secondary structure		S	T	T	G	G	G	S	T	T			T	T	S													G	G	G	S												T		S	S	.	.	G	G	G	S									S
Template Predicted Secondary structure																																															.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.			.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions