Job Description P76393 Confidence 100.00% Date Thu Jan 5 12:22:31 GMT 2012 Rank 44 Aligned Residues 265 % Identity 14% Template c3g0eA_ PDB info PDB header:transferase Chain: A: PDB Molecule:mast/stem cell growth factor receptor; PDBTitle: kit kinase domain in complex with sunitinib Resolution 1.60 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.									.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.
Query Sequence		T	T	L	G	R	E	L	G	K	G	G	E	G	A	V	Y	D	I	E	.	.	.	.	.	.	.	.	E	F	V	D	S	V	A	K	I	Y	H	T	P	P	P	A	L	K	Q	D	K	L	A	F	M	A	A	T	A	D	A	Q	L	L	N	Y	V	A	W	P	Q	A	T	L	H	G	G	R	G	G	K	V	I
Query Conservation																					.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.															.	.
Template Conservation																																											.	.
Template Sequence		L	S	F	G	K	T	L	G	A	G	A	F	G	K	V	V	E	A	T	A	Y	G	L	I	K	S	D	A	A	M	T	V	A	V	K	M	L	K	P	S	A	.	.	H	L	T	E	R	E	A	L	M	S	E	L	K	V	L	S	Y	L	G	N	H	M	N	I	V	N	L	L	G	A	C	T	I	G	G	P	T
Template Known Secondary structure												S	S										S	S	S	S	T	T												T	T		.	.																						T	T	B									S	S	S	S
Template Predicted Secondary structure																																											.	.
Template SS confidence
		589	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.			630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.												.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	F	M	M	P	K	V	S	G	K	E	P	I	H	M	I	Y	S	P	A	H	.	.	.	.	.	.	.	.	.	.	.	R	R	Q	S	Y	P	H	C	A	W	D	F	L	L	Y	V	A	R	N	I	A	S	S	F	A	T	V	H	E	H	G	H	V	V	G	D	V	N	Q	N	S	F	M	V	G	R	D	S
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	I	T	E	Y	C	C	Y	G	D	L	L	N	F	L	R	R	K	R	D	S	F	I	C	S	K	T	S	P	A	I	M	E	D	D	E	L	A	L	D	L	E	D	L	L	S	F	S	Y	Q	V	A	K	G	M	A	F	L	A	S	K	N	C	I	H	R	D	L	A	A	R	N	I	L	L	T	H	G	R
Template Known Secondary structure									T	T		B									G	G	G	G	S		S	S	S					B	T	T	B																										T	T				S			S	G	G	G					T	T	T
Template Predicted Secondary structure
Template SS confidence
		667	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	V	L	I	D	S	D	S	F	Q	I	N	A	N	G	T	L	H	L	C	E	V	G	V	S	H	F	T	P	P	E	L	Q	T	L	P	S	F	V	G	F	E	R	T	E	N	H	D	N	F	G	L	A	L	L	I	F	H	V	L	F	G	G	R	H	P	Y	S	G	V	P	L	I	S	D	A	G	N	A
Query Conservation
Alig confidence																										.	.
Template Conservation																										.	.
Template Sequence		I	T	K	I	C	D	F	G	L	A	R	D	I	K	N	D	S	N	Y	V	V	K	G	N	.	.	A	R	L	P	V	K	W	M	A	P	E	S	I	F	N	C	V	Y	T	F	E	S	D	V	W	S	Y	G	I	F	L	W	E	L	F	S	L	G	S	S	P	Y	P	G	M	P	V	D	S	K	F	Y	K	M
Template Known Secondary structure									G	G	G			G	G	G		T	T	S				T	T	.	.					G	G	G	S								T																				T	T	T			S	S	T	T				S
Template Predicted Secondary structure																										.	.
Template SS confidence
		805	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.			.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	T	D	I	T	H	F	R	Y	A	Y	A	S	D	N	Q	R	R	G	L	K	P	P	P	R	S	I	P	L	S	M	L	P	S	D	V	E	A	M	F	Q	Q	A	F	T	E	S	G	V	A	T	G	R	P	T	A	K	A	W	V	A	A	L	D	S	L	R	Q	Q
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Sequence		I	K	E	G	F	R	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	P	E	H	A	P	A	E	M	Y	D	I	M	K	T	C	W	D	A	D	.	.	P	L	K	R	P	T	F	K	Q	I	V	Q	L	I	E	K	Q	I	S	E
Template Known Secondary structure				T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T													T		S	S	.	.	G	G	G	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template SS confidence
		883	.	.	.	.	.	.																					890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910			.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions