Job Description P76393 Confidence 100.00% Date Thu Jan 5 12:22:31 GMT 2012 Rank 30 Aligned Residues 251 % Identity 15% Template c3fbvL_ PDB info PDB header:transferase, hydrolase Chain: L: PDB Molecule:serine/threonine-protein kinase/endoribonuclease ire1; PDBTitle: crystal structure of the oligomer formed by the kinase-ribonuclease2 domain of ire1 Resolution 3.20 Å

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		19	20	.	.	.	.	.	.	.	.		.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure												.						.																													.
Query SS confidence												.						.																													.
Query Sequence		R	E	L	G	K	G	G	E	G	A	.	V	Y	D	I	E	.	E	F	V	D	S	V	A	K	I	Y	H	T	P	P	P	A	L	K	Q	D	K	L	A	F	M	A	A	T	.	A	D	A	Q	L	L	N	Y	V	A	W	P	Q	A	T	L	H	G	G	R	G	G	K	V	I	G	F	M	M	P	K	V	S	G
Query Conservation												.						.																													.
Alig confidence												.						.																													.									.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.
Template Sequence		K	I	L	G	Y	G	S	S	G	T	V	V	F	Q	G	S	F	Q	G	R	P	V	A	V	K	R	M	L	I	D	F	C	D	I	A	L	M	E	I	K	L	L	T	E	S	D	D	H	P	N	V	I	R	Y	.	.	.	.	.	.	.	Y	C	S	E	T	T	D	R	F	L	Y	I	A	L	E	L	C	N	L
Template Known Secondary structure								T	T	T								S	S	S										G	G	G															T	T	S	T	T	B				.	.	.	.	.	.	.							T	T										S
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.
Template SS confidence
		678	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.								.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.														.	.	.	160	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	E	P	I	H	M	I	Y	S	P	A	H	R	R	Q	S	Y	P	H	C	A	W	D	F	L	L	Y	V	A	R	N	I	A	S	S	F	A	T	V	H	E	H	G	H	V	V	G	D	V	N	Q	N	S	F	M	V	G	R	D	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	L	I	D	S
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	N	L	Q	D	L	V	E	S	K	N	V	S	D	E	N	L	K	L	Q	K	E	Y	N	P	I	S	L	L	R	Q	I	A	S	G	V	A	H	L	H	S	L	K	I	I	H	R	D	L	K	P	Q	N	I	L	V	S	T	S	S	R	F	T	A	D	Q	Q	T	G	A	E	N	L	R	I	L	I	S	D	F
Template Known Secondary structure		.							T			S		S	T	T						S	S																				T	T							S	T	T	T											S			S	S		S							B
Template Predicted Secondary structure		.
Template SS confidence
			751	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		D	S	F	Q	I	N	A	N	G	T	.	.	L	H	L	C	E	V	G	V	S	H	F	T	P	P	E	L	Q	T	L	P	S	F	V	G	F	E	R	T	E	N	H	D	N	F	G	L	A	L	L	I	F	H	V	L	F	G	G	R	H	P	Y	S	G	V	P	L	I	S	D	A	G	N	A	L	E	T	D	I
Query Conservation												.	.
Alig confidence												.	.																						.	.																																							.	.	.	.	.	.	.
Template Conservation																																			.	.																																							.	.	.	.	.	.	.
Template Sequence		G	L	C	K	K	L	D	S	G	Q	F	R	N	L	N	N	P	S	G	T	S	G	W	R	A	P	E	L	L	E	E	S	T	.	.	K	R	R	L	T	R	S	I	D	I	F	S	M	G	C	V	F	Y	Y	I	L	S	K	G	K	H	P	F	G	D	K	Y	S	R	E	S	N	I	.	.	.	.	.	.	.
Template Known Secondary structure		S	S					T	T	T									S	G	G	G	G	G							S	T	T	T	.	.						T																T	T	S			T	T		S									.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.	.																																							.	.	.	.	.	.	.
Template SS confidence
		830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.			.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	H	F	R	Y	A	Y	A	S	D	N	Q	R	R	G	L	K	P	P	P	R	S	I	P	L	S	M	L	P	S	D	V	E	A	M	F	Q	Q	A	F	T	E	S	G	V	A	T	G	R	P	T	A	K	A	W	V	A	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																																		.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	I	R	G	I	F	S	L	D	E	M	K	C	L	H	D	R	S	L	I	A	E	A	T	D	L	I	S	Q	M	I	D	H	D	.	.	P	L	K	R	P	T	A	M	K	V	L	R	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.			T								T	T																		T		S	S	.	.	T	T	T	S								T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																		.	.
Template SS confidence
												932	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.			.	.	.	.	.	970	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions