Job Description P76393 Confidence 98.27% Date Thu Jan 5 12:22:31 GMT 2012 Rank 291 Aligned Residues 118 % Identity 15% Template c3f2rA_ PDB info PDB header:transferase Chain: A: PDB Molecule:choline kinase alpha; PDBTitle: crystal structure of human choline kinase alpha in complex2 with hemicholinium-3 Resolution 2.35 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.											.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.
Query Sequence		G	R	E	L	G	K	G	G	E	G	A	V	Y	D	I	E	E	F	.	.	.	.	.	.	.	.	.	.	V	D	S	V	A	K	I	Y	H	T	P	P	P	A	L	K	Q	D	K	L	A	F	M	A	A	T	A	D	A	Q	L	L	N	Y	V	A	W	P	Q	A	T	L	H	G	G	R	G	G	K	V	I	G
Query Conservation																				.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.										.	.	.	.	.												.	.	.	.	.	.																	.	.	.	.
Template Conservation																																							.	.	.	.	.												.	.	.	.	.	.																	.	.	.	.
Template Sequence		I	S	V	I	R	G	G	L	S	N	M	L	F	Q	C	S	L	P	D	T	T	A	T	L	G	D	E	P	R	K	V	L	L	R	L	Y	G	.	.	.	.	.	A	M	V	L	E	S	V	M	F	A	I	.	.	.	.	.	.	L	A	E	R	S	L	G	P	K	L	Y	G	I	F	P	Q	.	.	.	.	G
Template Known Secondary structure								S	S	S										T	T				S	S	S			S									.	.	.	.	.												.	.	.	.	.	.				T	T	S	S								T	T	.	.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.												.	.	.	.	.	.																	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.						150	.	.	.	.	.	.	.	.	.	160							.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.					.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	M	M	P	K	V	S	G	K	E	P	I	H	M	I	Y	S	P	A	H	R	R	Q	S	Y	P	H	C	A	W	D	F	L	L	Y	V	A	R	N	I	A	S	S	F	A	T	V	H	E	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	E	Q	F	I	P	S	R	R	L	D	T	E	E	L	S	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	S	A	E	I	A	E	K	M	A	T	F	H	G	M	K	M	P	F	N	K	E	P	K	W	L	F	G	T	M	E	K	Y	L	K	E	V	L	R	I	K	F	T	E	E
Template Known Secondary structure														G	G	G	G	G	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T				S	S			S																	T					S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.																.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
																																		138	.	140	.	.	.	.	.	.	.	.	.	150	.							.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	V	V	G	D	V	N	Q	N	S	F	M	V	.	.	.	.	.	.	G	R	D	S	K	V	V	L	I	D	S	D	S	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation
Template Sequence		S	R	I	K	K	L	H	K	L	L	S	Y	N	L	P	L	E	L	E	N	L	R	S	L	L	E	S	T	P	S	P	V	V	F	C	H	N	D	C	Q	E	G	N	I	L	L	L	E	G	R	E	N	S	E	K	Q	K	L	M	L	I	D	F	E	Y	S
Template Known Secondary structure												T	T															T	S									S			S	G	G	G					T	T	G	G	G		S	S		S							T	T
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions