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Job DescriptionP76393
Confidence100.00%DateThu Jan 5 12:22:31 GMT 2012
Rank189Aligned Residues224
% Identity15%Templatec3efwA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase 6; PDBTitle: structure of auroraa with pyridyl-pyrimidine urea inhibitor
Resolution2.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.... .....40.........50.........60.........70.........80.........90.
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Query Sequence  TTLGRELGKGGEGAVYDIEE. . . FVDSVAKIYHTPPPALKQDKLAFMAATADAQLLNYVAWPQATLHGGRGGKVIGFMMP
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Template Sequence  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN. ILRLYGYFHDATRVYLILE
Template Known Secondary structure  TTTTT

T
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TT.B


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   133......140.........150.........160.........170.........180.........190.. .......200.........210.
 
   92.......100.........110.........120.........130.........140.........150.........160.........170.
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Query Sequence  KVSGKEPIHMIYSPAHRRQSYPHCAWDFLLYVARNIASSFATVHEHGHVVGDVNQNSFMVGRDSKVVLIDSDSFQINANG
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Template Sequence  YAPLGTVYRELQKLS. . . . . . . KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFL. . . . . . . .
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   212.......220...... ...230.........240.........250.........260.........270......
 
   172.......180.........190.........200.........210.........220.........230.........240.........250.
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Query Sequence  TLHLCEVGVSHFTPPELQTLPSFVGFERTENHDNFGLALLIFHVLFGGRHPYSGVPLISDAGNALETDITHFRYAYASDN
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Template Sequence  . . . . . . . . . . DYLPPEM. . . . . . . . . . . IEKVDLWSLGVLCYEFL. VGKPPFEANTYQETYKRISRVEF. . . . . . . . . . .
Template Known Secondary structure  ..........TT

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   294.....300 .........310....... ..320.........330.........340
 
   252.......260.........270.........280.........290.........300
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Query Sequence  QRRGLKPPPRSIPLSMLPSDVEAMFQQAFTESGVATGRPTAKAWVAALD
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Template Sequence  . . . . . . . . . . . TFPDFVTEGARDLISRLLKHN. . PSQRPMLREVLEHPW
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   347..350.........360....... ..370.........380..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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