Job Description P76393 Confidence 100.00% Date Thu Jan 5 12:22:31 GMT 2012 Rank 64 Aligned Residues 253 % Identity 17% Template c3dpkA_ PDB info PDB header:transferase Chain: A: PDB Molecule:macrophage colony-stimulating factor 1 receptor; PDBTitle: cfms tyrosine kinase in complex with a pyridopyrimidinone2 inhibitor Resolution 1.95 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.						.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																			.	.	.	.	.														.	.	.	.													.
Query SS confidence																																			.	.	.	.	.														.	.	.	.													.
Query Sequence		N	I	K	V	F	T	S	T	G	E	L	T	T	L	G	R	E	L	G	K	G	G	E	G	A	V	Y	D	I	E	E	F	V	.	.	.	.	.	D	S	V	A	K	I	Y	H	T	P	P	P	A	.	.	.	.	L	K	Q	D	K	L	A	F	M	A	A	T	.	A	D	A	Q	L	L	N	Y	V	A	W	P
Query Conservation																																			.	.	.	.	.														.	.	.	.													.
Alig confidence																																			.	.	.	.	.														.	.	.	.													.									.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		Y	N	E	K	W	E	F	P	R	N	N	L	Q	F	G	K	T	L	G	A	G	A	F	G	K	V	V	E	A	T	A	F	G	L	G	A	V	L	K	V	A	V	K	M	L	K	S	T	A	H	A	D	E	K	E	A	L	M	S	E	L	K	I	M	S	H	L	G	Q	H	E	N	I	V	N	L	.	.	.	.
Template Known Secondary structure				G	G	G	B			G	G	G											S	S										S														T	T																							T	T	B				.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		571	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	T	L	H	G	G	R	G	G	K	V	I	G	F	M	M	P	K	V	S	G	K	E	P	I	H	M	I	Y	S	P	A	H	R	R	Q	S	Y	P	H	C	A	W	D	F	L	L	Y	V	A	R	N	I	A	S	S	F	A	T	V	H	E	H	G	H	V	V	G	D	V	N	Q	N	S	F	M	V	G	R
Query Conservation
Alig confidence		.	.	.																													.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																													.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	L	G	A	C	T	H	G	G	P	V	L	V	I	T	E	Y	C	C	Y	G	D	L	L	N	F	L	R	R	.	.	.	.	.	.	.	.	.	Q	L	S	S	R	D	L	L	H	F	S	S	Q	V	A	Q	G	M	A	F	L	A	S	K	N	C	I	H	R	D	V	A	A	R	N	V	L	L	T	N
Template Known Secondary structure		.	.	.						S	S	S	S									T	T										.	.	.	.	.	.	.	.	.																								T	T				S			S	G	G	G					G
Template Predicted Secondary structure		.	.	.																													.	.	.	.	.	.	.	.	.
Template SS confidence
					650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.										.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	K	V	V	L	I	D	S	D	S	F	Q	I	N	A	N	G	T	L	H	L	C	E	V	G	V	S	H	F	T	P	P	E	L	Q	T	L	P	S	F	V	G	F	E	R	T	E	N	H	D	N	F	G	L	A	L	L	I	F	H	V	L	F	G	G	R	H	P	Y	S	G	V	P	L	I	S	D	A	G
Query Conservation
Alig confidence																								.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.
Template Sequence		G	H	V	A	K	I	G	D	F	G	L	A	R	D	I	M	N	D	S	N	Y	I	.	.	.	.	.	.	V	R	L	P	V	K	W	M	A	P	E	S	I	F	D	C	V	Y	T	V	Q	S	D	V	W	S	Y	G	I	L	L	W	E	I	F	S	L	G	L	N	P	Y	P	G	I	L	V	N	S	K	F	Y
Template Known Secondary structure		G	G								T	T	T	S		G	G	G		T	T	S	B	.	.	.	.	.	.			B		G	G	G	S																												T	T	S			S	S	T	T			S	S
Template Predicted Secondary structure																								.	.	.	.	.	.
Template SS confidence
		789	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810							.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	L	E	T	D	I	T	H	F	R	Y	A	Y	A	S	D	N	Q	R	R	G	L	K	P	P	P	R	S	I	P	L	S	M	L	P	S	D	V	E	A	M	F	Q	Q	A	F	T	E	S	G	V	A	T	G	R	P	T	A	K	A	W	V	A	A	L	D
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Sequence		K	L	V	K	D	G	Y	Q	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	P	A	F	A	P	K	N	I	Y	S	I	M	Q	A	C	W	A	L	E	.	.	P	T	H	R	P	T	F	Q	Q	I	C	S	F	L	Q
Template Known Secondary structure						T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T													T		S	S	.	.	G	G	G	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template SS confidence
		867	.	.	870	.	.	.	.	.																					.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.			.	.	.	900	.	.	.	.	.	.	.	.	.	910	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions