Job Description P76393 Confidence 100.00% Date Thu Jan 5 12:22:31 GMT 2012 Rank 148 Aligned Residues 236 % Identity 17% Template c3dlsA_ PDB info PDB header:transferase Chain: A: PDB Molecule:pas domain-containing serine/threonine-protein kinase; PDBTitle: crystal structure of human pas kinase bound to adp Resolution 2.30 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50												.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																						.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	T	L	G	R	E	L	G	K	G	G	E	G	A	V	Y	D	I	E	E	.	.	.	F	V	D	S	V	A	K	I	Y	H	T	P	P	P	A	L	.	.	.	.	.	.	.	.	.	.	.	K	Q	D	K	L	A	F	M	A	A	T	A	D	A	Q	L	L	N	Y	V	A	W	P	Q	A	T	L	H	G	G
Query Conservation																						.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.																	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.
Template Sequence		Y	S	T	M	S	P	L	G	S	G	A	F	G	F	V	W	T	A	V	D	K	E	K	N	K	E	V	V	V	K	F	I	K	K	E	K	V	L	E	D	C	W	I	E	D	P	K	L	G	K	V	T	L	E	I	A	I	L	S	R	V	E	H	A	N	I	I	K	V	.	.	.	.	.	.	.	L	D	I	F
Template Known Secondary structure									S	S	S	S	S		S							T	T	T	T										S	T	T	S		T	T	S					T	T	T											T	T				T	T	B				.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.
Template SS confidence
		999	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.								.	.	1070	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	G	K	V	I	G	F	M	M	P	K	V	S	G	K	E	P	I	H	M	I	Y	S	P	A	H	R	R	Q	S	Y	P	H	C	A	W	D	F	L	L	Y	V	A	R	N	I	A	S	S	F	A	T	V	H	E	H	G	H	V	V	G	D	V	N	Q	N	S	F	M	V	G	R	D	S	K	V	V	L	I
Query Conservation
Alig confidence																													.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.
Template Sequence		E	N	Q	G	F	F	Q	L	V	M	E	K	H	G	S	G	L	D	L	F	A	F	I	D	R	H	P	.	.	.	.	.	.	R	L	D	E	P	L	A	S	Y	I	F	R	Q	L	V	S	A	V	G	Y	L	R	L	K	D	I	I	H	R	D	I	K	D	E	N	I	V	I	A	E	D	F	T	I	K	L	I
Template Known Secondary structure				S	S										T	T	S		B							T			.	.	.	.	.	.																								T	T				S			S	G	G	G					T	T	S
Template Predicted Secondary structure																													.	.	.	.	.	.
Template SS confidence
		1072	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.							.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	D	S	F	Q	I	N	A	N	G	T	L	H	L	C	E	V	G	V	S	H	F	T	P	P	E	L	Q	T	L	P	S	F	V	G	F	E	R	T	E	N	H	D	N	F	G	L	A	L	L	I	F	H	V	L	F	G	G	R	H	P	Y	S	G	V	P	L	I	S	D	A	G	N	A	L	E	T	D	I
Query Conservation
Alig confidence																														.	.	.	.																									.												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.																									.												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	F	G	S	A	A	Y	L	E	R	G	K	L	F	Y	T	F	C	G	T	I	E	Y	C	A	P	E	V	.	.	.	.	L	M	G	N	P	Y	R	G	P	E	L	E	M	W	S	L	G	V	T	L	Y	T	L	V	.	F	E	E	N	P	F	C	E	L	E	E	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T						T	T			B		S			S		G	G	G						.	.	.	.		T	T			B		S																	.		S	S		S		S	S	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.																									.												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1146	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.					.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.		.	.	1200	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	H	F	R	Y	A	Y	A	S	D	N	Q	R	R	G	L	K	P	P	P	R	S	I	P	L	S	M	L	P	S	D	V	E	A	M	F	Q	Q	A	F	T	E	S	G	V	A	T	G	R	P	T	A	K	A	W	V	A	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	E	A	A	I	H	P	P	Y	L	V	S	K	E	L	M	S	L	V	S	G	L	L	Q	P	V	.	.	P	E	R	R	T	T	L	E	K	L	V	T	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	T	T					S	S														T		S	S	.	.	G	G	G	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Template SS confidence
																		1209	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.			.	.	.	.	1240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions