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Job DescriptionP76393
Confidence100.00%DateThu Jan 5 12:22:31 GMT 2012
Rank162Aligned Residues250
% Identity14%Templatec3dbqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase ttk; PDBTitle: crystal structure of ttk kinase domain
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.... .....40.........50.........60.........70 .........80.
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Query Sequence  IKVFTSTGELTTLGRELGKGGEGAVYDIEE. . FVDSVAKIYHTPPPALKQDKLAFMAATADAQLLNYV. AWPQATLHGGR
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Template Sequence  NECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA. DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI
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   515....520.........530.........540.........550.........560 .........570.........580.........590...
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  GGKVIGFMMPKVSGKEPIHMIYSPAHRRQSYPHCAWDFLLYVARNIASSFATVHEHGHVVGDVNQNSFMVGRDSKVVLID
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Template Sequence  TDQYIYMVMECG. NIDLNSWLKKKK. . . . . . . SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG. MLKLID
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   594.....600..... ....610....... ..620.........630.........640.........650........ .660....
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  SDSFQINANGTLHLCEVGVSHFTPPELQTLPSFVGFERTENHDNFGLALLIFHVLFGGRHPYSGVPLISDAGNALETDIT
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Template Sequence  FGIA. . . . . . . . . . . . . . NQMVGTVNYMPPEAIKDMSISPKSDVWSLGCILYYMT. YGKTPFQQIINQISKLHAI. . . . .
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   665... .670.........680.........690.........700..... ....710.........720....
 
   242.......250.........260.........270.........280.........290.........300
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Query Sequence  HFRYAYASDNQRRGLKPPPRSIPLSMLPSDVEAMFQQAFTESGVATGRPTAKAWVAALD
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Template Sequence  . . . . . . . . . . . . . . IDPNHEIEFPDIPEKDLQDVLKCCLKRD. . PKQRISIPELLAHPY
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   748.750.........760.........770..... ....780.........790
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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