Job Description P76393 Confidence 100.00% Date Thu Jan 5 12:22:31 GMT 2012 Rank 183 Aligned Residues 220 % Identity 19% Template c3a60B_ PDB info PDB header:transferase Chain: B: PDB Molecule:ribosomal protein s6 kinase beta-1; PDBTitle: crystal structure of unphosphorylated p70s6k1 (form i) Resolution 2.80 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.							.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.
Query Sequence		S	T	G	E	L	T	T	L	G	R	E	L	G	K	G	G	E	G	A	V	Y	D	I	E	E	.	.	.	.	.	.	F	V	D	S	V	A	K	I	Y	H	T	P	P	P	A	L	K	Q	D	K	L	A	F	M	A	A	T	A	D	A	Q	L	L	N	Y	V	A	W	P	Q	A	T	L	H	G	G	R	G	G
Query Conservation																											.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Template Sequence		I	R	P	E	C	F	E	L	L	R	V	L	G	K	G	G	Y	G	K	V	F	Q	V	R	K	V	T	G	A	N	T	G	K	I	F	A	M	K	V	L	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	H	P	F	I	V	D	L	.	.	.	.	.	.	.	I	Y	A	F	Q	T	G
Template Known Secondary structure				G	G	G											S	S	S									S	S	T	T	T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	B				.	.	.	.	.	.	.							S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																	.	.	130	.	.	.	.	.								.	.	.	.	140	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	I	G	F	M	M	P	K	V	S	G	K	E	P	I	H	M	I	Y	S	P	A	H	R	R	Q	S	Y	P	H	C	A	W	D	F	L	L	Y	V	A	R	N	I	A	S	S	F	A	T	V	H	E	H	G	H	V	V	G	D	V	N	Q	N	S	F	M	V	G	R	D	S	K	V	V	L	I	D	S	D
Query Conservation
Alig confidence																									.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.
Template Sequence		G	K	L	Y	L	I	L	E	Y	L	S	G	G	E	L	F	M	Q	L	E	R	E	G	.	.	.	.	.	.	.	I	F	M	E	D	T	A	C	F	Y	L	A	E	I	S	M	A	L	G	H	L	H	Q	K	G	I	I	Y	R	D	L	K	P	E	N	I	M	L	N	H	Q	G	H	V	K	L	T	D	F	G
Template Known Secondary structure		S										T	T	T	T	S								T	.	.	.	.	.	.	.																								T	T				S				G	G	G					T	T					B				T
Template Predicted Secondary structure																									.	.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.								.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	Q	I	N	A	N	G	T	L	H	L	C	E	V	G	V	S	H	F	T	P	P	E	L	Q	T	L	P	S	F	V	G	F	E	R	T	E	N	H	D	N	F	G	L	A	L	L	I	F	H	V	L	F	G	G	R	H	P	Y	S	G	V	P	L	I	S	D	A	G	N	A	L	E	T	D	I	T	H	F
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.																								.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.																								.	.	.
Template Sequence		L	C	K	E	S	C	G	T	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	M	A	P	E	I	L	M	R	S	G	H	N	R	A	V	D	W	W	S	L	G	A	L	M	Y	D	M	L	.	T	G	A	P	P	F	T	G	E	N	R	K	K	T	I	D	K	I	L	K	C	K	L	.	.	.
Template Known Secondary structure		T									T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S						T	T	T	T	S	S	T																.		S	S		T	T			S	S														.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.																								.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.															.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.						.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.
Query Sequence		R	Y	A	Y	A	S	D	N	Q	R	R	G	L	K	P	P	P	R	S	I	P	L	S	M	L	P	S	D	V	E	A	M	F	Q	Q	A	F	T	E	S	G	V	A	T	G	R	P	T	.	.	.	.	.	A	K	A	W	V	A	A
Query Conservation																																																		.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.							.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	P	P	Y	L	T	Q	E	A	R	D	L	L	K	K	L	L	K	R	N	.	.	A	A	S	R	L	G	A	G	P	G	D	A	G	E	V	Q	A	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S	S												S		S		.	.	T	T	T	S	T	T		S	T	T	T						T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template SS confidence
																					311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.			.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions