Job Description P76393 Confidence 100.00% Date Thu Jan 5 12:22:31 GMT 2012 Rank 51 Aligned Residues 246 % Identity 15% Template c2vd5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:dmpk protein; PDBTitle: structure of human myotonic dystrophy protein kinase in2 complex with the bisindoylmaleide inhibitor bim viii Resolution 2.80 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.							.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																						.	.	.											.	.	.	.	.	.
Query SS confidence																						.	.	.											.	.	.	.	.	.
Query Sequence		T	T	L	G	R	E	L	G	K	G	G	E	G	A	V	Y	D	I	E	E	.	.	.	F	V	D	S	V	A	K	I	Y	H	.	.	.	.	.	.	T	P	P	P	A	L	K	Q	D	K	L	A	F	M	A	A	T	A	D	A	Q	L	L	N	Y	V	A	W	P	Q	A	T	L	H	G	G	R	G	G	K	V
Query Conservation																						.	.	.											.	.	.	.	.	.
Alig confidence																						.	.	.											.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.
Template Sequence		F	E	I	L	K	V	I	G	R	G	A	F	S	E	V	A	V	V	K	M	K	Q	T	G	Q	V	Y	A	M	K	I	M	N	K	W	D	M	L	K	R	G	E	V	S	C	F	R	E	E	R	D	V	L	V	N	G	D	R	R	W	I	T	Q	L	.	.	.	.	.	.	.	H	F	A	F	Q	D	E	N	Y
Template Known Secondary structure												S	S									T	T	T																		G	G	G													S		T	T	T	B				.	.	.	.	.	.	.							S	S
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.								.	.	.	.	.	140	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	F	M	M	P	K	V	S	G	K	E	P	I	H	M	I	Y	S	P	A	H	R	R	Q	S	Y	P	H	C	A	W	D	F	L	L	Y	V	A	R	N	I	A	S	S	F	A	T	V	H	E	H	G	H	V	V	G	D	V	N	Q	N	S	F	M	V	G	R	D	S	K	V	V	L	I	D	S	D	S	F
Query Conservation
Alig confidence																								.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.
Template Sequence		L	Y	L	V	M	E	Y	Y	V	G	G	D	L	L	T	L	L	S	K	F	G	E	.	.	.	.	.	.	R	I	P	A	E	M	A	R	F	Y	L	A	E	I	V	M	A	I	D	S	V	H	R	L	G	Y	V	H	R	D	I	K	P	D	N	I	L	L	D	R	C	G	H	I	R	L	A	D	F	G	S	C
Template Known Secondary structure											S		B									S	S	.	.	.	.	.	.																								T	T							S	G	G	G					T	T	S								T	T
Template Predicted Secondary structure																								.	.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.							.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		166	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure								.	.																			.	.
Query SS confidence								.	.																			.	.
Query Sequence		Q	I	N	A	N	G	.	.	T	L	H	L	C	E	V	G	V	S	H	F	T	P	P	E	L	Q	.	.	T	L	P	S	F	V	G	F	E	R	T	E	N	H	D	N	F	G	L	A	L	L	I	F	H	V	L	F	G	G	R	H	P	Y	S	G	V	P	L	I	S	D	A	G	N	A	L	E	T	D	I	T
Query Conservation								.	.																			.	.
Alig confidence								.	.																			.	.																												.
Template Conservation																																																									.
Template Sequence		L	K	L	R	A	D	G	T	V	R	S	L	V	A	V	G	T	P	D	Y	L	S	P	E	I	L	Q	A	V	G	G	G	P	G	T	G	S	Y	G	P	E	C	D	W	W	A	L	G	V	F	A	Y	E	M	F	.	Y	G	Q	T	P	F	Y	A	D	S	T	A	E	T	Y	G	K	I	V	H	Y	K	E	H
Template Known Secondary structure						T	T	S					S	S			S		G	G	G											T		T	T		S				T																.		S	S		T	T			S	S										T
Template Predicted Secondary structure																																																									.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.				290	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		H	F	R	Y	A	Y	A	S	D	N	Q	R	R	G	L	K	P	P	P	R	S	I	P	L	S	M	L	P	S	D	V	E	A	M	F	Q	Q	A	F	T	E	S	G	V	A	T	G	R	.	.	.	P	T	A	K	A	W	V	A	A
Query Conservation																																																		.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.		.	.					.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.		.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	L	P	G	V	P	E	E	A	R	D	F	I	Q	R	L	L	C	.	P	.	.	P	E	T	R	L	G	R	G	G	A	G	D	F	R	T	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T	T	S	S	.		.	.	G	G	G		T	T	T	T	T						T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.		.	.
Template SS confidence
																							297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.			.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions