Phyre 2 alignment of P76393 with c2chlA

Job Description P76393
Confidence 100.00% Date Thu Jan 5 12:22:31 GMT 2012

Rank 82 Aligned Residues 279

% Identity 15% Template c2chlA_

PDB info PDB header:transferase Chain: A: PDB Molecule:casein kinase i isoform gamma-3; PDBTitle: structure of casein kinase 1 gamma 3

Resolution 1.95 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.											.
Query SS confidence																								.	.	.											.
Query Sequence	G	E	L	T	T	L	G	R	E	L	G	K	G	G	E	G	A	V	Y	D	I	E	E	.	.	.	F	V	D	S	V	A	K	I	Y	H	.	T	P	P	P	A	L	K	Q	D	K	L	A	F	M	A	A	T	A	D	A	Q	L	L	N	Y	V	A	W	P	Q	A	T	L	H	G	G	R	G	G	K	V	I	G
Query Conservation																								.	.	.											.
Alig confidence																								.	.	.											.																											.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.
Template Sequence	G	P	N	F	R	V	G	K	K	I	G	C	G	N	F	G	E	L	R	L	G	K	N	L	Y	T	N	E	Y	V	A	I	K	L	E	P	M	K	S	R	A	P	Q	L	H	L	E	Y	R	F	Y	K	Q	L	G	S	G	D	G	I	P	Q	V	.	.	.	.	.	.	Y	Y	F	G	P	C	G	K	Y	N	A
Template Known Secondary structure	T	T	T											T	T									T	T	T	T										T	T		S	S															S		T	T					.	.	.	.	.	.							T	T
Template Predicted Secondary structure																																																																.	.	.	.	.	.
Template SS confidence
	29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.							.	.	.	.	.	.	.	.	100	.	.

	88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.						.	.	.	160	.	.
Predicted Secondary structure																																																																						.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.
Query Sequence	F	M	M	P	K	V	S	G	K	E	P	I	H	M	I	Y	S	P	A	H	R	R	Q	S	Y	P	H	C	A	W	D	F	L	L	Y	V	A	R	N	I	A	S	S	F	A	T	V	H	E	H	G	H	V	V	G	D	V	N	Q	N	S	F	M	V	G	R	D	S	K	.	.	.	.	.	V	V	L	I	D	S
Query Conservation																																																																						.	.	.	.	.
Alig confidence							.														.	.	.	.	.	.																																												.	.	.	.	.
Template Conservation							.														.	.	.	.	.	.
Template Sequence	M	V	L	E	L	L	.	G	P	S	L	E	D	L	F	D	L	C	D	R	.	.	.	.	.	.	T	F	S	L	K	T	V	L	M	I	A	I	Q	L	I	S	R	M	E	Y	V	H	S	K	N	L	I	Y	R	D	V	K	P	E	N	F	L	I	G	R	P	G	N	K	T	Q	Q	V	I	H	I	I	D	F
Template Known Secondary structure							.			B								T	T	T	.	.	.	.	.	.																								T	T								G	G	G						T	T	S	T	T	T	T	S
Template Predicted Secondary structure							.														.	.	.	.	.	.
Template SS confidence
	103	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.							.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.

	163	.	.	.	.	.	.	170	.	.	.	.	.	.				.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence	D	S	F	Q	I	N	A	N	G	T	L	H	L	C	.	.	.	E	V	G	V	S	H	F	T	P	P	E	L	Q	T	L	P	S	F	V	G	F	E	R	T	E	N	H	D	N	F	G	L	A	L	L	I	F	H	V	L	F	G	G	R	H	P	Y	S	G	V	P	L	I	S	D	A	G	N	A	L	E	T	D
Query Conservation															.	.	.
Alig confidence															.	.	.																																									.
Template Conservation																																																										.
Template Sequence	A	L	A	K	E	Y	I	D	P	E	T	K	K	H	I	P	Y	R	E	H	K	S	L	T	G	T	A	R	Y	M	S	I	N	T	H	L	G	K	E	Q	S	R	R	D	D	L	E	A	L	G	H	M	F	M	Y	F	L	.	R	G	S	L	P	W	Q	G	L	K	A	D	T	L	K	E	R	Y	Q	K	I	G
Template Known Secondary structure	T	T				S	B		T	T	T		S	B											S		T	T	T							T	T																					.		S	S		T	T	T	T				S	S
Template Predicted Secondary structure																																																										.
Template SS confidence
	176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	I	T	H	F	R	Y	A	Y	A	S	D	N	Q	R	R	G	L	K	P	P	P	R	S	I	P	L	S	M	L	P	S	D	V	E	A	M	F	Q	Q	A	F	T	E	S	G	V	A	T	G	R	P	T	A	K	A	W	V	A	A	L	D	S	L	R	Q	Q	L	K	K	C	I	V	S	A	M	H	V	Y	P	A
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Sequence	D	T	K	R	A	T	P	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	L	C	E	N	F	P	E	M	A	T	Y	L	R	Y	V	R	R	L	D	.	.	F	F	E	K	P	D	Y	D	Y	L	R	K	L	F	T	D	L	F	D	R	K	G	Y	M	F	D	Y	E	Y	D	W	I	G	K
Template Known Secondary structure						S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	T																.	.	T	T																			T	T				S				T	T	T	T	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template SS confidence
	255	.	.	.	.	260	.	.																.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence	Q	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
	318	.

Download:

Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions