Job Description P76393 Confidence 100.00% Date Thu Jan 5 12:22:31 GMT 2012 Rank 58 Aligned Residues 250 % Identity 15% Template c2bdwB_ PDB info PDB header:transferase Chain: B: PDB Molecule:hypothetical protein k11e8.1d; PDBTitle: crystal structure of the auto-inhibited kinase domain of2 calcium/calmodulin activated kinase ii Resolution 1.80 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																										.	.	.																			.	.	.	.	.
Query SS confidence																										.	.	.																			.	.	.	.	.
Query Sequence		T	G	E	L	T	T	L	G	R	E	L	G	K	G	G	E	G	A	V	Y	D	I	E	E	.	.	.	F	V	D	S	V	A	K	I	Y	H	T	P	P	P	A	L	K	Q	.	.	.	.	.	D	K	L	A	F	M	A	A	T	A	D	A	Q	L	L	N	Y	V	A	W	P	Q	A	T	L	H	G	G	R	G
Query Conservation																										.	.	.																			.	.	.	.	.
Alig confidence																										.	.	.																			.	.	.	.	.																		.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.
Template Sequence		F	S	D	N	Y	D	V	K	E	E	L	G	K	G	A	F	S	V	V	R	R	C	V	H	K	T	T	G	L	E	F	A	A	K	I	I	N	T	K	K	L	S	A	R	D	F	Q	K	L	E	R	E	A	R	I	C	R	K	L	Q	H	P	N	I	V	R	L	.	.	.	.	.	.	.	H	D	S	I	Q	E
Template Known Secondary structure			T	T	T											T	T									T	T	T												S	S																						T	T	B				.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.								.	.	.	.	80	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.				.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.
Query SS confidence																																																																							.	.	.
Query Sequence		G	K	V	I	G	F	M	M	P	K	V	S	G	K	E	P	I	H	M	I	Y	S	P	A	H	R	R	Q	S	Y	P	H	C	A	W	D	F	L	L	Y	V	A	R	N	I	A	S	S	F	A	T	V	H	E	H	G	H	V	V	G	D	V	N	Q	N	S	F	M	V	.	.	.	G	R	D	S	K	V	V	L
Query Conservation																																																																							.	.	.
Alig confidence																										.	.	.	.	.	.	.																																							.	.	.
Template Conservation																										.	.	.	.	.	.	.
Template Sequence		E	S	F	H	Y	L	V	F	D	L	V	T	G	G	E	L	F	E	D	I	V	A	R	E	.	.	.	.	.	.	.	F	Y	S	E	A	D	A	S	H	C	I	Q	Q	I	L	E	S	I	A	Y	C	H	S	N	G	I	V	H	R	N	L	K	P	E	N	L	L	L	A	S	K	A	K	G	A	A	V	K	L
Template Known Secondary structure		S	S											S		B						T	T		S	.	.	.	.	.	.	.																								T	T		B					S	G	G	G				S		S	S	T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.								.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	S	D	S	F	Q	I	N	A	N	G	T	L	H	L	C	E	V	G	V	S	H	F	T	P	P	E	L	Q	T	L	P	S	F	V	G	F	E	R	T	E	N	H	D	N	F	G	L	A	L	L	I	F	H	V	L	F	G	G	R	H	P	Y	S	G	V	P	L	I	S	D	A	G	N	A	L	E	T	D
Query Conservation
Alig confidence																															.	.	.	.	.																								.																						.
Template Conservation																															.	.	.	.	.																								.																						.
Template Sequence		A	D	F	G	L	A	I	E	V	N	D	S	E	A	W	H	G	F	A	G	T	P	G	Y	L	S	P	E	V	.	.	.	.	.	L	K	K	D	P	Y	S	K	P	V	D	I	W	A	C	G	V	I	L	Y	I	L	L	.	V	G	Y	P	P	F	W	D	E	D	Q	H	R	L	Y	A	Q	I	K	A	G	.
Template Known Secondary structure					T	T		B			T	T			B				S		S		G	G	G						.	.	.	.	.			T			B		T																.		S	S		S	S			S	S										T	T	.
Template Predicted Secondary structure																															.	.	.	.	.																								.																						.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.						.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	H	F	R	Y	A	Y	A	S	D	N	Q	R	R	G	L	K	P	P	P	R	S	I	P	L	S	M	L	P	S	D	V	E	A	M	F	Q	Q	A	F	T	E	S	G	V	A	T	G	R	P	T	A	K	A	W	V	A	A	L	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Y	D	Y	P	S	P	E	W	D	T	V	T	P	E	A	K	S	L	I	D	S	M	L	T	V	N	.	.	P	K	K	R	I	T	A	D	Q	A	L	K	V	P	W
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	G	G	G	G	S												S		S	S	.	.	G	G	G	S							T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Template SS confidence
																			229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.			.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions