Job Description P76393 Confidence 100.00% Date Thu Jan 5 12:22:31 GMT 2012 Rank 193 Aligned Residues 261 % Identity 14% Template c2ac5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:map kinase-interacting serine/threonine kinase 2; PDBTitle: structure of human mnk2 kinase domain mutant d228g Resolution 3.20 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																			.															.	.	.																			.	.	.										.
Query SS confidence																			.															.	.	.																			.	.	.										.
Query Sequence		N	I	K	V	F	T	S	T	G	E	L	T	T	L	G	R	E	.	L	G	K	G	G	E	G	A	V	Y	D	I	E	E	.	.	.	F	V	D	S	V	A	K	I	Y	H	T	P	P	P	A	L	K	Q	.	.	.	D	K	L	A	F	M	A	A	T	.	A	D	A	Q	L	L	N	Y	V	A	W	P	Q	A
Query Conservation																			.															.	.	.																			.	.	.										.
Alig confidence																			.															.	.	.																			.	.	.										.									.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		T	D	S	F	S	G	R	F	E	D	V	Y	Q	L	Q	E	D	V	L	G	E	G	A	H	A	R	V	Q	T	C	I	N	L	I	T	S	Q	E	Y	A	V	K	I	I	E	K	Q	P	G	H	I	R	S	R	V	F	R	E	V	E	M	L	Y	Q	C	Q	G	H	R	N	V	L	E	L	.	.	.	.	.	.
Template Known Secondary structure		S		S	S	S			G	G	G	S							S					S	S									S	S	S													S	S																T				T	T	B				.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	H	G	G	R	G	G	K	V	I	G	F	M	M	P	K	V	S	G	K	E	P	I	H	M	I	Y	S	P	A	H	R	R	Q	S	Y	P	H	C	A	W	D	F	L	L	Y	V	A	R	N	I	A	S	S	F	A	T	V	H	E	H	G	H	V	V	G	D	V	N	Q	N	S	F	M	V	G	R	D	S
Query Conservation
Alig confidence		.																															.	.	.	.	.	.	.
Template Conservation		.																															.	.	.	.	.	.	.
Template Sequence		.	I	E	F	F	E	E	E	D	R	F	Y	L	V	F	E	K	M	R	G	G	S	I	L	S	H	I	H	K	R	R	.	.	.	.	.	.	.	H	F	N	E	L	E	A	S	V	V	V	Q	D	V	A	S	A	L	D	F	L	H	N	K	G	I	A	H	R	D	L	K	P	E	N	I	L	C	E	H	P	N
Template Known Secondary structure		.							S	S										T	T		B									S	.	.	.	.	.	.	.																							T	T	T				S				G	G	G						T	T
Template Predicted Secondary structure		.																															.	.	.	.	.	.	.
Template SS confidence
			146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.								.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	V	L	I	D	S	D	S	F	Q	I	N	A	N	G	T	L	H	L	C	E	V	G	V	S	H	F	T	P	P	E	L	Q	T	L	P	S	F	V	G	F	E	R	T	E	N	H	D	N	F	G	L	A	L	L	I	F	H	V	L	F	G	G	R	H	P	Y	S	G	V	P	L	I	S	D	A	G	N	A
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.																																												.
Template Conservation										.	.	.	.	.	.	.	.	.	.																																												.
Template Sequence		Q	V	S	P	V	K	I	C	.	.	.	.	.	.	.	.	.	.	D	F	G	P	C	G	S	A	E	Y	M	A	P	E	V	V	E	A	F	S	E	E	A	S	I	Y	D	K	R	C	D	L	W	S	L	G	V	I	L	Y	I	L	L	.	S	G	Y	P	P	F	V	G	R	C	G	S	D	C	G	W	A	C
Template Known Secondary structure								B		.	.	.	.	.	.	.	.	.	.						S	S	G	G	G								S	S	S					T	T	T	T																.		S	S		S	S					S	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.																																												.
Template SS confidence
		218	.	220	.	.	.	.	.											.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	T	D	I	T	H	F	R	Y	A	Y	A	S	D	N	Q	R	R	G	L	K	P	P	P	R	S	I	P	L	S	M	L	P	S	D	V	E	A	M	F	Q	Q	A	F	T	E	S	G	V	A	T	G	R	P	T	A	K	A	W	V	A	A
Query Conservation
Alig confidence							.	.	.	.	.	.	.																																					.	.
Template Conservation							.	.	.	.	.	.	.																																					.	.
Template Sequence		P	A	C	Q	N	.	.	.	.	.	.	.	M	L	F	E	S	I	Q	E	G	K	Y	E	F	P	D	K	D	W	A	H	I	S	C	A	A	K	D	L	I	S	K	L	L	V	R	D	.	.	A	K	Q	R	L	S	A	A	Q	V	L	Q	H
Template Known Secondary structure							.	.	.	.	.	.	.								T	T										T	T	S												S		S		.	.	T	T	T	S									S
Template Predicted Secondary structure							.	.	.	.	.	.	.																																					.	.
Template SS confidence
		312	.	.	.	.								.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.			.	.	.	.	.	.	.	360	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions