Job Description P76393 Confidence 99.89% Date Thu Jan 5 12:22:31 GMT 2012 Rank 266 Aligned Residues 143 % Identity 13% Template c1zp9A_ PDB info PDB header:transferase Chain: A: PDB Molecule:rio1 kinase; PDBTitle: crystal structure of full-legnth a.fulgidus rio1 serine kinase bound2 to atp and mn2+ ions. Resolution 2.00 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																									.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	E	L	T	T	L	G	R	E	L	G	K	G	G	E	G	A	V	Y	D	I	E	E	.	.	.	F	V	D	S	V	A	K	I	Y	H	T	P	P	P	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Q	D	K	L	A	F	M	A	A	T	A	D	A	Q	L	L	N	Y	V
Query Conservation																									.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	Y	I	T	A	X	G	G	V	I	S	T	G	K	E	A	N	V	F	Y	A	D	G	V	F	D	G	K	P	V	A	X	A	V	K	I	Y	R	I	X	D	E	Y	L	Y	G	D	E	R	F	D	X	P	K	E	K	V	F	I	W	T	E	K	E	F	R	N	L	E	R	A	K	E	A	G	V	S	V	P	Q
Template Known Secondary structure		T	S												S	S											T	T														G	G	G	T	T	T		T	T	S																								T	T
Template Predicted Secondary structure
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		A	W	P	Q	A	T	L	H	G	G	R	G	G	K	V	I	G	F	M	M	P	K	V	S	G	K	E	P	I	H	M	I	Y	S	P	A	H	R	R	Q	S	Y	P	H	C	A	W	D	F	L	L	Y	V	A	R	N	I	A	S	S	F	A	T	V	.	H	E	H	G	H	V	V	G	D	V	N	Q	N	S	F
Query Conservation																																																																		.
Alig confidence			.	.	.	.	.	.	.	.	.																													.	.	.	.	.																						.
Template Conservation			.	.	.	.	.	.	.	.	.																													.	.	.	.	.
Template Sequence		P	.	.	.	.	.	.	.	.	.	Y	T	Y	X	K	N	V	L	L	X	E	F	I	G	E	D	E	L	P	A	P	T	L	V	E	L	G	R	.	.	.	.	.	E	L	K	E	L	D	V	E	G	I	F	N	D	V	V	E	N	V	K	R	L	Y	Q	E	A	E	L	V	H	A	D	L	S	E	Y	N	I
Template Known Secondary structure			.	.	.	.	.	.	.	.	.					T	T										T	T					B					G	G	.	.	.	.	.	G	G	G	G	S																			T	S					S	S		S	T	T	S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.																													.	.	.	.	.
Template SS confidence
		137										.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.						.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	G	R	D	S	K	V	V	L	I	D	S	D	S	F	Q	I	N	A	N
Query Conservation
Alig confidence				.	.
Template Conservation				.	.
Template Sequence		X	Y	.	.	I	D	K	V	Y	F	I	D	X	G	Q	A	V	T	L	R	H
Template Known Secondary structure				.	.	S	S	S							T	T				T	T	S
Template Predicted Secondary structure				.	.
Template SS confidence
		203	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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