Job Description P31435 Confidence 99.95% Date Thu Jan 5 11:47:26 GMT 2012 Rank 1 Aligned Residues 408 % Identity 12% Template d1pv7a_ SCOP info MFS general substrate transporter MFS general substrate transporter LacY-like proton/sugar symporter Resolution 3.60

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	V	K	E	K	I	G	Y	G	M	G	D	A	A	S	H	I	I	F	D	N	V	M	L	Y	M	M	F	F	Y	T	D	I	F	G	I	P	A	G	F	V	G	T	M	F	L	V	A	R	A	L	D	A	I	S	D	P	C	M	G	L	L	A	D	R	T	R	S	R	W	G	K	F	R	P	W	V	L	F
Query Conservation
Alig confidence																																																																									.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.
Template Sequence		L	K	N	T	N	F	W	M	F	G	L	F	F	F	F	Y	F	F	I	M	G	A	Y	F	P	F	F	P	I	W	L	H	D	I	N	H	I	S	K	S	D	T	G	I	I	F	A	A	I	S	L	F	S	L	L	F	Q	P	L	F	G	L	L	S	D	K	L	G	L	R	K	.	.	.	.	.	Y	L	L	W
Template Known Secondary structure				S																																																					T												T	T		T	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.						.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	L	P	F	G	I	V	C	V	L	A	Y	S	T	P	D	L	S	M	N	G	K	M	I	Y	A	A	I	T	Y	T	L	L	T	L	L	Y	T	V	V	N	I	P	Y	C	A	L	G	G	V	I	T	N	D	P	T	Q	R	I	S	L	Q	S	W	R	F	V	L	A	T	A	G	G	M	L	S	T	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	T	G	M	L	V	M	F	A	P	F	F	I	F	I	F	G	P	L	L	Q	Y	N	I	L	V	G	S	I	V	G	G	I	Y	L	G	F	C	F	N	A	G	A	P	A	V	E	A	F	I	E	K	V	S	R	R	S	N	F	E	F	G	R	A	R	M	F	G	C	V	G	W	A	L	G	A	S	I	V
Template Known Secondary structure									T								T							T	T								T	T	T	T	G	G	G	G	G	T	T																	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		M	M	P	L	V	N	L	I	G	G	D	N	K	P	L	G	F	Q	G	G	I	A	V	L	S	V	V	A	F	M	M	L	A	F	C	F	F	T	T	K	E	R	V	E	A	P	P	T	T	T	S	M	R	E	D	L	R	D	I	W	Q	N	D	Q	W	R	I	V	G	L	L	T	I	F	N	I	L	A	V	.
Query Conservation																																																																																	.
Alig confidence																																																																																	.
Template Conservation
Template Sequence		G	I	M	F	T	I	N	N	Q	F	V	F	W	L	G	S	G	C	A	L	I	L	A	V	L	L	F	F	A	K	T	D	A	P	S	S	A	T	V	A	N	A	V	G	A	N	H	S	A	F	S	L	K	L	A	L	E	L	F	R	Q	P	K	L	W	F	L	S	L	Y	V	I	G	V	S	C	T	Y	D	V
Template Known Secondary structure																													S	S				S		S	S	S		S	S					S														T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
				245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	C	V	R	G	G	A	M	M	Y	Y	V	T	W	I	L	G	T	P	E	V	F	V	A	F	L	T	T	Y	C	V	G	N	L	I	G	S	A	L	A	K	P	L	T	D	W	K	C	K	V	T	I	F	W	W	T	N	A	L	L	A	V	I	S	L	A	M	F	F	V	P	M	Q	A	S	I	T	M	F
Query Conservation		.	.
Alig confidence		.	.																																																																					.	.
Template Conservation																																																																								.	.
Template Sequence		F	D	Q	Q	F	A	N	F	F	T	S	F	F	A	T	G	E	Q	G	T	R	V	F	G	Y	V	T	T	M	G	E	L	L	N	A	S	I	M	F	F	A	P	L	I	I	N	R	I	G	G	K	N	A	L	L	L	A	G	T	I	M	S	V	R	I	I	G	S	S	F	.	.	A	T	S	A	L	E	V	V
Template Known Secondary structure											T	T	S	S	S																									T	T																														T	.	.
Template Predicted Secondary structure																																																																								.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.			.	310	.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.		.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		V	F	I	F	V	I	G	V	L	H	Q	L	V	T	P	I	Q	W	V	M	M	S	D	T	V	D	Y	G	E	W	C	N	G	K	R	L	T	G	I	S	F	A	G	.	T	L	F	V	L	K	L	G	L	A	F	G	G	A	L	I	G	W	M	L	A	Y	G	G	Y	D	A	A	E	K	A	Q	N	S	A	T
Query Conservation																																													.
Alig confidence																												.	.	.	.	.	.	.											.																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	K	T	L	H	M	F	E	V	P	F	L	L	V	G	C	F	K	Y	I	T	S	Q	F	E	.	.	.	.	.	.	.	V	R	F	S	A	T	I	Y	L	V	C	F	C	F	F	K	Q	L	A	M	I	F	M	S	V	L	A	G	N	M	Y	E	S	I	G	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																										S		.	.	.	.	.	.	.	G	G	G										T	T	T																					.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.								.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	I	I	I	A	L	F	T	I	V	P	A	I	C	Y	L	L	S	A	I	I	A	K	R	Y	Y	S	L	T	T	H	N	L	K	T	V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	Q	G	A	Y	L	V	L	G	L	V	A	L	G	F	T	L	I	S	V	F	T	L	S	G	P	G	P	L	S	L	L	R	R	Q	V	N	E
Template Known Secondary structure																								S			S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.