Job Description P31435 Confidence 34.94% Date Thu Jan 5 11:47:26 GMT 2012 Rank 7 Aligned Residues 222 % Identity 10% Template c3hd6A_ PDB info PDB header:membrane protein, transport protein Chain: A: PDB Molecule:ammonium transporter rh type c; PDBTitle: crystal structure of the human rhesus glycoprotein rhcg Resolution 2.10 Å

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		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	T	T	S	M	R	E	D	L	R	D	I	W	Q	N	D	Q	W	R	I	V	G	L	L	T	I	F	N	I	L	A	V	C	V	R	G	G	A	M	M	Y	Y	V	T	W	I	L	G	T	P	E	V	F	V	A	F	L	T	T	Y	C	V	G	N	L	I	G	S	A	L	A	K	P	L	T	D	W	K	C
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.
Template Sequence		Y	R	R	N	L	E	Q	S	K	E	R	Q	N	S	V	Y	Q	S	D	L	F	A	M	I	G	T	L	F	L	W	M	Y	W	P	S	F	N	S	A	I	S	Y	H	.	.	.	.	.	.	.	G	D	S	Q	H	R	A	A	I	N	T	Y	C	S	L	A	A	C	V	L	T	S	V	A	I	S	S	A	L	H
Template Known Secondary structure				T	T	G	G	G	G	T	T	T	S	S																								T	T	T	T		S	S	.	.	.	.	.	.	.																													T	S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.								.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	T	I	F	W	W	T	N	A	L	L	A	V	I	S	L	A	M	F	F	V	P	M	Q	A	S	I	T	M	F	V	F	I	F	V	I	G	V	L	H	Q	L	V	T	P	I	Q	W	V	M	M	S	D	T	V	D	Y	G	E	W	C	N	G	K	R	L	T	G	I	S	F	A	G	T	L	F	V	L	K
Query Conservation
Alig confidence																																																																											.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		K	K	G	K	L	D	M	V	H	I	Q	N	A	T	L	A	G	G	V	A	V	G	T	A	A	E	M	M	L	M	P	Y	G	A	L	I	I	G	F	V	C	G	I	I	S	T	L	G	F	V	Y	L	T	P	F	L	E	S	R	L	H	I	Q	D	T	C	G	I	N	N	L	H	G	.	.	.	.	.	.	.
Template Known Secondary structure		T	T											G	G	G						T	T	T	T	T	T	T		S																																				T	T						T		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	L	A	F	G	G	A	L	I	G	W	M	L	A	Y	G	G	Y	D	A	A	E	K	A	Q	N	S	A	T	I	S	I	I	I	A	L	F	T	I	V	P	A	I	C	Y	L	L	S	A	I	I	A	K	R	Y	Y	S	L	T	T	H	N	L	K	T	V	M	E	Q	L	A	Q	G	K	R	R	C	Q	Q
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.
Template Sequence		I	P	G	I	I	G	G	I	V	G	A	V	T	A	A	S	D	W	.	.	.	.	.	.	.	.	T	A	R	T	Q	G	K	F	Q	I	Y	G	L	L	V	T	L	A	M	A	L	M	G	G	I	I	V	G	L	I	L	R	L	P	F	W	G	Q	P	S	D	E	N	C	F	E	D	A	V	Y	W	E	M	P
Template Known Secondary structure																				.	.	.	.	.	.	.	.																																T	S	T	T	S					T	T	S	T	T		G	G	G	T	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.									.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
		452	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	T	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	N	S
Template Known Secondary structure		T	T	T
Template Predicted Secondary structure
Template SS confidence
		440	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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