Job Description P31435 Confidence 5.06% Date Thu Jan 5 11:47:26 GMT 2012 Rank 69 Aligned Residues 48 % Identity 10% Template c2rkkA_ PDB info PDB header:lipid transport Chain: A: PDB Molecule:vacuolar protein sorting-associated protein vta1; PDBTitle: crystal structure of s.cerevisiae vta1 n-terminal domain Resolution 2.90 Å

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		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.							.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure																										.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.
Query Sequence		P	A	I	C	Y	L	L	S	A	I	I	A	K	R	Y	Y	S	L	T	T	H	N	L	K	.	.	.	.	.	.	T	V	M	E	Q	L	A	Q	G	K	R	R	C	Q	Q	Q	F	T	S	Q	E	V	Q	N
Query Conservation																										.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.
Template Conservation
Template Sequence		G	I	I	G	Y	Y	L	Q	L	Y	A	V	E	L	I	L	S	E	E	D	R	S	Q	E	M	T	A	L	A	T	E	L	L	D	T	I	E	A	F	K	K	E	I	G	L	H	V	M	N	T	L	I	H	D
Template Known Secondary structure																	T	T		T	T																						T	T			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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