Return to main results Retrieve Phyre Job Id

Job DescriptionP31435
Confidence15.26%DateThu Jan 5 11:47:26 GMT 2012
Rank12Aligned Residues20
% Identity15%Templatec1by0A_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:protein (hepatitis delta antigen); PDBTitle: n-terminal leucine-repeat region of hepatitis delta antigen
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   432.......440.........450.
Predicted Secondary structure 
Query SS confidence 



















Query Sequence  THNLKTVMEQLAQGKRRCQQ
Query Conservation           

         
Alig confidence 



















Template Conservation 



















Template Sequence  RKKLEELERDLRKLKKKIKK
Template Known Secondary structure 

Template Predicted Secondary structure 

Template SS confidence 



















   1........10.........20
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions