|   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | 80 | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
Query Sequence |   |
D | A | A | I | A | R | E | A | I | L | H | G | A | D | A | V | Y | I | G | G | P | G | F | G | A | R | H | N | A | S | N | S | L | K | D | I | A | E | L | V | P | F | A | H | R | Y | G | A | K | I | F | V | T | L | N | T | I | L | H | D | D | E | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | P | A | Q | R | L | I |
Query Conservation |   |
|   |
|   |
|   |
|
|
|   |   |
|
|
|
|
|
|
|
|   |   |   |
|   |
|
|   |   |
|   |
|   |   |
|
|
|   |
|
|
|   |   |
|
|   |   |
|   |
|
|
|
|
|
|
|
|
|   |   |   |   |
|
| . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |   |
|   |   |
|
|
|   |
|
|
|
|
|   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|   | . | . |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
S | L | D | Y | A | E | K | L | R | K | L | G | Y | R | R | Q | I | V | S | S | K | V | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | D | P | S | F | L | K | S | L | R | E | I | D | V | E | P | V | F | S | L | D | T | . |
. |
R | G | G | R | V | A | F | K | G | W | L | A | E | E | E | I | D | P | V | S | L | L |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |
| T | T |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  |  |  | . | . |  | T | T |  |  |
|
| T | T |
| S | S |
| S |
|
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  | . | . |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
|
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
  |
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
100 | . | . | . | . | . | . | . | |
|
. | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | |
|
|
|
|
|
. | . | . | . | . | 140 | . | |
|
|
|
|
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  | . | . |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . |
|
|  |  |  |  |
| . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
Query Sequence |   |
T | D | L | Y | Q | T | G | V | D | A | L | I | V | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | M | G | I | L | E | L | D | . |
. |
I | P | P | I | E | L | H | A | S | T | Q | C | D | I | R | T | V | E | K | A | K | F | L | S | D | V | G | . |
. |
. |
. |
. |
. |
F | T | Q | I | V | L | A | . |
. |
. |
. |
. |
Query Conservation |   |
  |   |
|   |   |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|   |
|
|
|   |
|   | . | . |   |
|   |
|   |
|
|
|
|
|
|
|   |
|   |
|   |   |   |
|   |
|
|   |   |
|
| . | . | . | . | . | . |   |   |
|
|
|
|
| . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
| . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |
|
|   |
|   |
|   |   |
|
|
|   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
| . | . |
|   |
|   |   |
|
|   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |
|
|
|
|
|   |
|
|   |   |
Template Sequence |   |
K | R | L | K | E | Y | G | L | E | E | I | V | H | T | E | I | E | K | D | G | T | L | Q | E | H | D | F | S | L | T | K | K | I | A | I | E | A | E | V | K | V | L | A | A | G | G | . |
. |
I | S | S | E | N | S | L | K | T | A | Q | K | V | H | T | E | T | N | G | L | L | K | G | V | I | V | G | R | A | F | L | E |
Template Known Secondary structure |   |
 |  |  |  | T | T | T |
|
|  |  |  |  |  |  | T | T |  |  |  |  | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  | S | S | . | . |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |  |  |  |  |  |  |
|  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . | . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
151 | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | |
|
. | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . |
  |
  |   |
142 | . | . | . | . | . | . | . | 150 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | E | L | N | L | D | Q | I | R | A | I | H | Q |
Query Conservation |   |
|
|
|
|
|   |
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |
|   |   |   |   |   |   |
Template Sequence |   |
G | I | L | T | V | E | V | X | K | R | Y | A | R |
Template Known Secondary structure |   |
T | S | S |
|  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
229 | 230 | . | . | . | . | . | . | . | . | . | 240 | . |
  |