|   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
|
|
|
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
. | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|  |  |  | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . |  |  |
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | R | L | E | L | L | S | P | A | R | D | A | A | I | A | R | E | A | I | L | H | G | A | D | A | V | Y | I | G | G | P | . |
. |
. |
. |
G | F | G | A | R | H | N | A | S | N | S | L | K | D | . |
I | A | E | L | V | P | F | A | H | R | Y | G | A | K | I | F | V | . |
T | L | N | T | I | L | H | D | D | E | L | E |
Query Conservation |   |
  |
|   |
|
|
|
|
|
|
|
|   |
|   |
|   |
|
|
|   |   |
|
|
|
|
|
|
|
|   |   | . | . | . | . |   |
|   |
|
|   |   |
|   |
|   |   |
|
| . |
|   |
|
|
|   |   |
|
|   |   |
|   |
|
|
|
| . |
|
|
|
|
|   |   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |
|
|
|
|   |   |
|
|   |
|   |
|   |
|
|   |
|   |
|
|
|
|
|
|   |   |   |   |   |
|
|   |   |
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|
|   |
|
|   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |
Template Sequence |   |
G | H | K | W | A | M | L | T | A | Y | D | Y | S | T | A | R | I | F | D | E | A | G | I | P | V | L | L | V | G | D | S | A | A | N | V | V | Y | G | Y | D | T | T | V | P | I | S | I | D | E | L | I | P | L | V | R | G | V | V | R | G | A | P | H | A | L | V | V | A | D | L | P | F | G | S | Y | E | A | G | P | T |
Template Known Secondary structure |   |
T |
|
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |
| T | T |  |  |  |  | T | T |
|
| S | S | S | S | S |
|
| G | G | G | T |  |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |
|
| T | T | S | S | T | T |
|  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
  |
  |   |
80 | . | . | . | . | . | . | . | . | . | |
90 | . | . | . | . | . | . | . | . | . | 100 | |
|
|
|
. | . | . | . | . | . | . | . | . | |
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | . |  |
|
|
|
|  |  |  |  |
|
| . | . | . | . |  |  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | A | Q | R | L | I | T | D | L | Y | . |
Q | T | G | V | D | A | L | I | V | Q | D | . |
. |
. |
. |
M | G | I | L | E | L | D | I | P | . |
P | I | E | L | H | A | S | T | Q | C | D | I | R | T | V | E | . |
. |
. |
. |
. |
K | A | K | F | L | S | D | V | G | F | T | Q | I | V | L | A | R | E | L | N | L | D | Q |
Query Conservation |   |
  |   |   |   |   |
|   |   |
|   | . |   |   |
|
|
|
|
|
|
|
|
| . | . | . | . |   |
|
|
|   |
|   |   |
| . |   |
|   |
|
|
|
|
|
|
|   |
|   |
|   |   | . | . | . | . | . |   |
|   |
|
|   |   |
|
|   |   |
|
|
|
|
|
|
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|   |
|   |   |   |
|
|
|
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|
|
|   |
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|   |   |
|   |
|   |
|
|
|
|
|   |   |
|
|
|
|   | . |
|
|   |   |
|
Template Sequence |   |
A | A | L | A | A | A | T | R | F | L | K | D | G | G | A | H | A | V | K | L | E | G | G | E | R | V | A | E | Q | I | A | C | L | T | A | A | G | I | P | V | M | A | H | I | G | F | T | P | G | D | A | A | E | Q | T | I | A | D | A | I | A | V | A | E | A | G | A | F | A | V | V | M | E | M | . |
V | P | A | E | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |  | B | S | G | G | G |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  | S | . |
|
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
113 | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | |
. | . | . | 190 | . |
  |
  |   |
149 | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | R | A | I | H | Q | A | T | D | A | T | I | E | F | F | I | H | G | A | L | C |
Query Conservation |   |
|   |   |
|   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |   |   |
|
|
|
|
|
|
|
|
|   |   |
|
Template Sequence |   |
A | T | Q | I | T | G | K | L | T | I | P | T | V | G | I | G | A | G | P | N | C |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
| S | S |
|  |  |  |  | S | S |
| S |
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
206 | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . |
  |