Job Description P76104 Confidence 73.62% Date Thu Jan 5 12:18:59 GMT 2012 Rank 322 Aligned Residues 84 % Identity 26% Template d1lwha2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 2.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.					.	.	.	30	.	.	.	.													.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.
Query SS confidence																.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.
Query Sequence		P	A	R	D	A	A	I	A	R	E	A	I	L	H	.	.	.	.	G	A	D	A	V	Y	I	G	.	.	.	.	.	.	.	.	.	.	.	.	G	P	G	F	G	A	R	H	N	A	S	N	S	L	K	D	I	A	E	L	V	P	F	A	H	R	Y	G	A	K	I	F	V	T	L	N	T	.	.	.	.	.
Query Conservation																.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.
Alig confidence																.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.
Template Conservation
Template Sequence		G	V	G	D	F	R	G	L	K	N	A	V	S	Y	L	K	E	L	G	I	D	F	V	W	L	M	P	V	F	S	S	I	S	F	H	G	Y	D	V	V	D	F	Y	S	F	K	A	E	Y	G	S	E	R	E	F	K	E	M	I	E	A	F	H	D	S	G	I	K	V	V	L	D	L	P	I	H	H	T	G	F
Template Known Secondary structure		S	S									T							T	T		S											S	S	S	S			S		S							G	G	G																T	T									T	T	B			T
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
																																																															72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	L	H	D	D	E	L	E	P	A	Q	R	L	I	T	D	L	Y	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	H	T	W	F	Q	K	A	L	K	G	D	P	H	Y	R	D	Y	Y	V	W	A	N	K	E	T	D	L	D	E	R	R	E	W	D	G	E	K	I	W	H	P	L	E	D	G	R	F	Y	R	G	L	F	G	P	F	S	P	D	L	N	Y	D	N	P	Q	V	F	D	E	M	K	R	L	V	L	H	L	L	D
Template Known Secondary structure		T	S								T	T						T	T	B		B			T	T			T	T		B		S	S	S			B						T	T	S						T	T		T	T	S		B	B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		91	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	V	D	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	G	V	D	G	F
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions