Return to main results Retrieve Phyre Job Id

Job DescriptionP76104
Confidence47.89%DateThu Jan 5 12:18:59 GMT 2012
Rank449Aligned Residues82
% Identity21%Templated1ea9c3
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution3.2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.... .....40.........50.........60......... 70..
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Query Sequence  AAIAREAILHGADAVYIG. . . . . . . . . . . . GPGFGARHNASNSLKDIAELVPFAHRYGAKIFVTL. . NTI. . . . . . . . . .
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Template Sequence  IDHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFNHSGRTFPPFVDV
Template Known Secondary structure  TT
S


SS
SSSSTTS
S
TT


TTT

TTTT



SB

TTT
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   175....180.........190.........200.........210.........220.........230.........240.........250....
 
   73......80......... 90........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LHDDELEPAQRLITDLY. QTGVDALIV
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Template Conservation                                         


   
 
   
      
    





 
Template Sequence  LKNGEKSKYKDWFHIRSLPLEVVDGIPTYDTFAFEPLMPKLNTEHPDVKEYLLKAAEYWIRETGIDGWRL
Template Known Secondary structure  TTTTT
TTTTSS
B
SSS


TTS

SB
BSSS
TTSBB

TTS

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   255....260.........270.........280.........290.........300.........310.........320....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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