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Job DescriptionP76104
Confidence94.24%DateThu Jan 5 12:18:59 GMT 2012
Rank95Aligned Residues182
% Identity15%Templatec3inpA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:d-ribulose-phosphate 3-epimerase; PDBTitle: 2.05 angstrom resolution crystal structure of d-ribulose-phosphate 3-2 epimerase from francisella tularensis.
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40.........50.........60.........70.........80.........90.......
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Query Sequence  AIAREAILHGADAVYIGGPGFGARHNASNSLKDIAELVPFAHRYGAKIFVTLNTILHDDELEPAQRLITDLYQTGVDALI
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Template Sequence  DDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPV. . . . . . . . . DALIESFAKAGATSIV
Template Known Secondary structure  TT


BSSSSS
B


T

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   20.........30.........40.........50.........60.........70.... .....80.........90
 
   98.100.. .......110.........120.........130.........140..... ....150.........160
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Query Sequence  VQDMG. . . . . . ILELDIPPIELHASTQCDIRTVEKAKFLSDVGFTQIVLARELN. . . . . . . . . . . LDQIRAIHQATDATI
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Template Sequence  FHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMSVNPGFQKFIPAMLDKAKEISKWISSTDRDI
Template Known Secondary structure 
GGG
S
TTTS
TT

SGGGTTTGGG
S
S
TT




TTTS

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   91........100.........110.........120.........130.........140.........150.........160.........170
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  EFFIHGALCVAYSGQCYISHAQTGRSANRGDCSQACRLPYTLKDDQGRVVSYEKHLLSMKDNDQTANLGALIDAGVRSFK
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Template Sequence  LLEI. . . . . . . . . . . . . . . . . DGGVNPY. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NIAEIAVCGVNAFV
Template Known Secondary structure  .................SS

TT......................................TTTT

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   173... ...180... ......190.......
 
   241........250.........260...
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Query Sequence  IEGRYKDMSYVKNITAHYRQMLD
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Template Sequence  AGSAIFNSDSYKQTIDKMRDELN
Template Known Secondary structure  STSS
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   198.200.........210.........220
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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