|   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
|
|
|
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | H | R | L | E | L | L | S | P | A | R | D | A | A | I | A | R | E | A | I | L | H | G | A | D | A | V | Y | I | G | G | P | . |
. |
. |
. |
G | F | G | A | R | H | N | A | S | N | S | L | K | D | I | A | E | L | V | P | F | A | H | R | Y | G | A | K | I | F | V | T | L | N | T | I | L | H | D | D | E | L | E | P |
Query Conservation |   |
  |   |
|   |
|
|
|
|
|
|
|
|   |
|   |
|   |
|
|
|   |   |
|
|
|
|
|
|
|
|   |   | . | . | . | . |   |
|   |
|
|   |   |
|   |
|   |   |
|
|
|   |
|
|
|   |   |
|
|   |   |
|   |
|
|
|
|
|
|
|
|
|   |   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|
|   |   |
|   |
|
|
|   |
|
|   |   |
|
|   |   |   |
|   |
|   |
|   |
|
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
| . |   |   |   |   |   |   |
|
|
|
|
|   |
|   |
|
|
|   |   |   |   |
Template Sequence |   |
A | N | E | I | L | Q | I | P | G | A | H | D | A | X | A | A | L | V | A | R | N | T | G | F | L | A | L | Y | L | S | G | A | A | Y | T | A | S | K | G | L | P | D | L | G | I | V | T | S | T | E | V | A | E | R | A | R | D | L | . |
V | R | A | T | D | L | P | V | L | V | D | I | D | T | G | F | G | G | V | L | N |
Template Known Secondary structure |   |
S | S | S |
|  |  |  |  | B |
| S | S |  |  |  |  |  |  |  |  |  | T | T |
| S |
|  |  |  |
|  |  |  |  |  |  |  |  | T |
|
| S | S | S |
| S |
|  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |
|
|
|  |  |  |  |
| T | T |
| S | S | S |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | |
. | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | |
|
|
. | . | 110 | . | . | . | . | . | . | . | . | . | 120 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 130 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  | . | . | . |
|
|
|
|
|  |  |  |  |
|
|
|
| . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Q | R | L | I | T | D | L | Y | Q | T | G | V | D | A | L | I | V | Q | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
M | G | I | L | E | L | D | . |
. |
. |
I | P | P | I | E | L | H | A | S | T | Q | C | D | . |
. |
. |
. |
. |
I | R | T | V | E | K | A | K | F | L | S |
Query Conservation |   |
  |   |   |   |
|   |   |
|   |   |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|
|   |
|   | . | . | . |   |
|   |
|   |
|
|
|
|
|
|
|   | . | . | . | . | . |
|   |
|   |   |   |
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |   |   |   |   |
|
|
|   |
|
|   |
|
|
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |
|   |   |
|   |   |
|   |
|
|
|
|
|   |   |   |   |   |   |   |
|
|
|   |
|
|   |
|
|   |
Template Sequence |   |
V | A | R | T | A | V | E | X | V | E | A | K | V | A | A | V | Q | I | E | D | Q | Q | L | P | K | K | C | G | H | L | N | G | K | K | L | V | T | T | E | E | L | V | Q | K | I | K | A | I | K | E | V | A | P | S | L | Y | I | V | A | R | T | D | A | R | G | V | E | G | L | D | E | A | I | E | R | A | N | A | Y | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |
| B |
| S | S |
|
| T | T |
| T | T |
|
|
| B |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |  |
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
103 | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . |
  |
  |   |
132 | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 |
Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | V | G | F | T | Q | I | V | L | A | R | E | L | N | L | D | Q | I | R | A | I | H | Q | A | T | D | A | T | I |
Query Conservation |   |
  |
|
|   |   |
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|   |   |   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
Template Sequence |   |
K | A | G | A | D | A | I | F | P | E | A | L | Q | S | E | E | E | F | R | L | F | N | S | K | V | N | A | P | L |
Template Known Secondary structure |   |
 |  | T |
| S |  |  |  |  | T | T |
|
| S |  |  |  |  |  |  |  |  |  |  | S |
| S |
| B |
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
183 | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . |
  |