Job Description P76104 Confidence 94.18% Date Thu Jan 5 12:18:59 GMT 2012 Rank 97 Aligned Residues 140 % Identity 20% Template c3g8rA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:probable spore coat polysaccharide biosynthesis protein e; PDBTitle: crystal structure of putative spore coat polysaccharide biosynthesis2 protein e from chromobacterium violaceum atcc 12472 Resolution 2.49 Å

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		17	.	.	20	.	.	.	.	.	.	.	.						.	30	.	.	.	.	.																		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure														.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	I	A	R	E	A	I	L	H	G	A	.	.	.	.	.	D	A	V	Y	I	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	F	G	A	R	H	N	A	S	N	S	L	K	D	I	A	E	L	V	P	F	A	H	R	Y	G	A	K	I	F	V	T	L	N	T	I	L	H
Query Conservation														.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		V	A	L	I	R	A	I	R	E	S	C	Q	G	F	D	F	D	F	G	F	K	L	Q	Y	R	N	L	D	T	F	I	H	S	S	F	K	G	R	D	D	V	K	Y	V	K	R	F	E	E	T	R	L	Q	P	E	Q	X	Q	K	L	V	A	E	X	K	A	N	G	F	K	A	I	C	T	P	F	D	.	.	.
Template Known Secondary structure												T	T	T			S															S		G	G	G	T	T			S	S	S	S							T																	T	T									S	.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.						.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																										.	.	.	.	.												.															.	.																			.	.	.	.	.
Query SS confidence																										.	.	.	.	.												.															.	.																			.	.	.	.	.
Query Sequence		D	D	E	L	E	P	A	Q	R	L	I	T	D	L	Y	Q	T	G	V	D	A	L	I	V	.	.	.	.	.	Q	D	M	G	I	L	E	L	D	I	P	.	P	I	E	L	H	A	S	T	Q	C	D	I	R	T	.	.	V	E	K	A	K	F	L	S	D	V	G	F	T	Q	I	V	L	A	.	.	.	.	.
Query Conservation																										.	.	.	.	.												.															.	.																			.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																		.	.	.	.	.												.															.	.																			.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	E	E	S	V	D	L	I	E	A	H	G	I	E	I	I	K	I	A	S	C	S	F	T	D	W	P	L	L	E	R	I	A	R	S	D	K	P	V	V	A	S	T	A	G	A	R	R	E	D	I	D	K	V	V	S	F	X	L	H	R	G	K	D	L	T	I	X	H	C	V	A	E	Y
Template Known Secondary structure		.	.	.	.	.	.	.										T	T								S	S	S	T	T										T	S		S							T	T															T	T	T												S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
						142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	R	E	L	N	L	D	Q	I	R	A	I	H	Q	A	T	D	A	T	I	E	F	F	I	H	G	A	L	C	V	A	Y	S	G	Q
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.
Template Sequence		P	T	P	D	D	H	L	H	L	A	R	I	K	T	L	R	Q	Q	Y	A	.	.	.	.	.	.	.	.	.	G	V	R	I	G	Y	S	T	H
Template Known Secondary structure		S			G	G	G			T	T										T	.	.	.	.	.	.	.	.	.	T	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.										.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions