Job Description P76104 Confidence 93.80% Date Thu Jan 5 12:18:59 GMT 2012 Rank 105 Aligned Residues 180 % Identity 17% Template c3ez4B_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-methyl-2-oxobutanoate hydroxymethyltransferase; PDBTitle: crystal structure of 3-methyl-2-oxobutanoate2 hydroxymethyltransferase from burkholderia pseudomallei Resolution 2.10 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.																										.	.
Query SS confidence																																		.	.	.	.																										.	.
Query Sequence		S	H	R	L	E	L	L	S	P	A	R	D	A	A	I	A	R	E	A	I	L	H	G	A	D	A	V	Y	I	G	G	P	.	.	.	.	G	F	G	A	R	H	N	A	S	N	S	L	K	D	I	A	E	L	V	P	F	A	H	R	Y	.	.	G	A	K	I	F	V	T	L	N	T	I	L	H	D	D	E	L
Query Conservation																																		.	.	.	.																										.	.
Alig confidence																																		.	.	.	.																										.	.															.
Template Conservation																																																																															.
Template Sequence		A	G	E	K	I	A	M	L	T	S	Y	D	A	S	F	A	A	L	L	D	R	A	N	V	D	V	Q	L	I	G	D	S	L	G	N	V	L	Q	G	Q	A	T	T	L	P	V	T	L	D	D	I	A	Y	H	T	A	C	V	A	R	A	Q	P	R	G	L	V	V	A	D	L	P	F	G	T	Y	G	.	T	P
Template Known Secondary structure		T	T										S										T	T		S						T	T					T	T			S	S	S	T	T																T			S	S								T	T	S		S	.	S
Template Predicted Secondary structure																																																																															.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																								.	.	.	.								.																			.
Query SS confidence																								.	.	.	.								.																			.
Query Sequence		E	P	A	Q	R	L	I	T	D	L	Y	Q	T	G	V	D	A	L	I	V	Q	D	.	.	.	.	M	G	I	L	E	L	D	.	I	P	P	I	E	L	H	A	S	T	Q	C	D	I	R	T	V	E	.	K	A	K	F	L	S	D	V	G	F	T	Q	I	V	L	A	R	E	L	N	L	D	Q	I	R	A	I
Query Conservation																								.	.	.	.								.																			.
Alig confidence																								.	.	.	.								.																			.																		.
Template Conservation																																																																								.
Template Sequence		A	D	A	F	A	S	A	V	K	L	M	R	A	G	A	Q	M	V	K	L	E	G	G	E	W	L	A	E	T	V	R	F	L	V	E	R	A	V	P	V	C	A	H	V	G	L	G	A	A	Q	L	L	R	D	A	R	A	V	E	E	A	G	A	Q	L	I	V	L	E	A	.	V	P	T	L	V	A	A	E	V
Template Known Secondary structure														T	T		S								G	G	G										T	T																									T		S						S	.
Template Predicted Secondary structure																																																																								.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Q	A	T	D	A	T	I	E	F	F	I	H	G	A	L	C	V	A	Y	S	G	Q	C	Y	I	S	H	A	Q	T	G	R	S	A	N	R
Query Conservation
Alig confidence																			.	.	.
Template Conservation																			.	.	.
Template Sequence		T	R	E	L	S	I	P	T	I	G	I	G	A	G	A	E	C	.	.	.	S	G	Q	V	L	V	L	H	D	M	L	G	V	F	P	G	K
Template Known Secondary structure						S	S						S	S		S		S	.	.	.	S										T	T			S	S
Template Predicted Secondary structure																			.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.				.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions