Return to main results Retrieve Phyre Job Id

Job DescriptionP76104
Confidence95.67%DateThu Jan 5 12:18:59 GMT 2012
Rank58Aligned Residues133
% Identity13%Templatec3cixA_
PDB info PDB header:adomet binding proteinChain: A: PDB Molecule:fefe-hydrogenase maturase; PDBTitle: x-ray structure of the [fefe]-hydrogenase maturase hyde from2 thermotoga maritima in complex with thiocyanate
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.... .....50.........60.........70.........80...
Predicted Secondary structure 


















....










Query SS confidence 




































. . . .






































Query Sequence  LELLSPARDAAIAREAILHGADAVYIGGPGFGARHNA. . . . SNSLKDIAELVPFAHRYGAKIFVTLNTILHDDELEPAQR
Query Conservation   







 
 
 


  







   
 

  
.... 
  


 


  

  
 








    

     
Alig confidence 




































....











.

























Template Conservation 
         
 
  
  

        

        
        
     .    
  
  
 







 

   
Template Sequence  VTLSLGEWPREYYEKWKEAGADRYLLRHETANPVLHRKLRPDTSFENRLNLLT. LKELGYETGAGSMVGLPGQTIDDLVD
Template Known Secondary structure 




TT




B
S

TT



.TT

BS
TT

Template Predicted Secondary structure 



















.








Template SS confidence 















































































   133......140.........150.........160.........170.........180..... ....190.........200.........210.
 
   84.....90....... ..100.........110.........120.........130.........140
Predicted Secondary structure 



.......................

















Query SS confidence 













. . . . . . . . . . . . . . . . . . . . . . .










































Query Sequence  LITDLYQTGVDALI. . . . . . . . . . . . . . . . . . . . . . . VQDMGILELDIPPIELHASTQCDIRTVEKAKFLSDVGFTQIVL
Query Conservation   
  
   





.......................


 


 
  
 
 






 
 
   
 

  

  



Alig confidence 













.......................










































Template Conservation   
  
  
    
 
  
 
 




           

 

  

  
   
                 
  


    
Template Sequence  DLLFLKEHDFDMVGIGPFIPHPDTPLANEKKGDFTLTLKMVALTRILLPDSNIPATTAMGTIVPGGREITLRCGANVIMP
Template Known Secondary structure  T
S





TTSTTTTS



STTSB
B

STTTTT



Template Predicted Secondary structure 






























Template SS confidence 















































































   213......220.........230.........240.........250.........260.........270.........280.........290..
 
   141
Predicted Secondary structure 
Query SS confidence 
Query Sequence  A
Query Conservation 
Alig confidence 
Template Conservation   
Template Sequence  N
Template Known Secondary structure  B
Template Predicted Secondary structure 
Template SS confidence 
   293
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions