Job Description P76104 Confidence 74.54% Date Thu Jan 5 12:18:59 GMT 2012 Rank 315 Aligned Residues 143 % Identity 24% Template c3bolB_ PDB info PDB header:transferase Chain: B: PDB Molecule:5-methyltetrahydrofolate s-homocysteine PDBTitle: cobalamin-dependent methionine synthase (1-566) from2 thermotoga maritima complexed with zn2+ Resolution 1.85 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.													70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	E	A	I	L	H	G	A	D	A	V	Y	I	G	G	P	G	F	G	A	R	H	N	A	S	N	S	L	K	D	.	.	.	.	.	I	A	E	L	V	P	F	A	H	R	Y	G	A	K	I	F	V	T	L	.	.	.	.	.	.	.	.	.	.	.	.	N	T	I	L	H	D	D	E	L	E	P	A	Q	R
Query Conservation																																.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	S	Y	I	E	S	G	S	D	V	I	L	T	N	T	F	G	A	T	R	M	K	L	R	K	H	G	L	E	D	K	L	D	P	I	V	R	N	A	V	R	I	A	R	R	A	A	G	E	K	L	V	F	G	D	I	G	P	T	G	E	L	P	Y	P	L	G	S	T	L	F	E	E	F	Y	E	N	F	R	E
Template Known Secondary structure								T		S					S		T	T		S					G	G	G	T		G	G	G																	T	T	S										S			B	T	T	T	S	S	B
Template Predicted Secondary structure
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		84	.	.	.	.	.	90	.	.	.	.	.	.	.				.	.	100	.	.								.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.									.	.	.	.	.	.	130	.	.	.	.	.	.	.	.					.	140	.
Predicted Secondary structure																.	.	.						.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.																.	.	.	.
Query SS confidence																.	.	.						.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.																.	.	.	.
Query Sequence		L	I	T	D	L	Y	Q	T	G	V	D	A	L	I	.	.	.	V	Q	D	M	G	.	.	.	.	.	.	.	I	L	E	L	D	I	P	P	I	E	L	H	A	S	T	Q	C	D	I	R	T	.	.	.	.	.	.	.	.	V	E	K	A	K	F	L	S	D	V	G	F	T	Q	I	.	.	.	.	V	L	A
Query Conservation																.	.	.						.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.																.	.	.	.
Alig confidence																.	.	.						.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation
Template Sequence		T	V	E	I	M	V	E	E	G	V	D	G	I	I	F	E	T	F	S	D	I	L	E	L	K	A	A	V	L	A	A	R	E	V	S	R	D	V	F	L	I	A	H	M	T	F	D	E	K	G	R	S	L	T	G	T	D	P	A	N	F	A	I	T	F	D	E	L	D	I	D	A	L	G	I	N	C	S	L	G
Template Known Secondary structure										T		S																									S	S	S										T	T	S			T	T	S												T	S	S		S						S	S	S
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	L	N	L	D	Q	I	R	A	I	H	Q	A	T	D	A	T	I	E	F	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	E	E	I	L	P	I	F	Q	E	L	S	Q	Y	T	D	K	F	L	V	V	E
Template Known Secondary structure														T	T			S
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions