 |
Job Description | P76104 | Confidence | 70.83% | Date | Thu Jan 5 12:18:59 GMT 2012 |
Rank | 341 | Aligned Residues | 114 |
% Identity | 19% | Template | c3bg5C_ |
PDB info |
PDB header:ligase | Chain: C: PDB Molecule:pyruvate carboxylase; |
PDBTitle: crystal structure of staphylococcus aureus pyruvate2 carboxylase
|
Resolution | 2.80 Å |
|
 |
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | I | A | R | E | A | I | L | H | G | A | D | A | V | Y | I | G | G | P | G | F | G | A | R | H | N | A | S | N | S | L | K | D | I | A | E | L | V | P | F | A | H | R | Y | G | A | K | I | F | V | T | L | N | T | I | . |
. |
. |
. |
. |
. |
. |
. |
L | H | D | D | E | L | E | P | A | Q | R | L | I | T | D | L |
Query Conservation |   |
  |
|   |
|   |
|
|
|   |   |
|
|
|
|
|
|
|
|   |   |   |
|   |
|
|   |   |
|   |
|   |   |
|
|
|   |
|
|
|   |   |
|
|   |   |
|   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|
|   |
|   |   |   | . | . | . | . | . | . | . | . |   |
|   |
|
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |
Template Sequence |   |
H | K | F | V | Q | E | S | A | K | A | G | I | D | V | F | R | I | . |
. |
. |
. |
. |
. |
. |
. |
F | D | S | L | N | W | V | D | Q | M | K | V | A | N | E | A | V | Q | E | A | G | K | I | S | E | G | T | I | C | Y | T | G | D | I | L | N | P | E | R | S | N | I | Y | T | L | E | Y | Y | V | K | L | A | K | E | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  | . | . | . | . | . | . | . | . |
|
| T | T |
|
| G | G | G | G |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |
|
| S |
| T | T |
| T | T | T |
| S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . |
  |
  |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | |
|
. | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
. | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |
|
|  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  | . | . |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Query Sequence |   |
Y | Q | T | G | V | D | A | L | I | V | Q | D | M | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | L | E | L | D | . |
. |
I | P | P | I | E | L | H | A | S | T | Q | C | D | I | R | T | V | E | K | A | K | F | L | S | . |
D | V | G | F | T | Q | I |
Query Conservation |   |
  |   |   |
|
|
|
|
|
|
|
|
|   |
| . | . | . | . | . | . | . | . | . | . |
|
|   |
|   | . | . |   |
|   |
|   |
|
|
|
|
|
|
|   |
|   |
|   |   |   |
|   |
|
|   | . |   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|   |
|   |
|
|
|
|   |
|   |
|   |
|   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |
|
|   |   |
|   |
|
|
|   |
|
|
|
|
|
|   |
|
|
|
|   |
|
|
|   |   |
|
Template Sequence |   |
E | R | E | G | F | H | I | L | A | I | K | D | M | A | G | L | L | K | P | K | A | A | Y | E | L | I | G | E | L | K | S | A | V | D | L | P | I | H | L | H | T | H | D | T | S | G | N | G | L | L | T | Y | K | Q | A | I | D | A | G | V | D | I | I |
Template Known Secondary structure |   |
 |  | T | T |
| S |  |  |  |  |  |  | T | T | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |
|  |  |  |  |  |
|
| T | T | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
731 | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|