Job Description P76104 Confidence 84.22% Date Thu Jan 5 12:18:59 GMT 2012 Rank 248 Aligned Residues 121 % Identity 21% Template c3b0vD_ PDB info PDB header:oxidoreductase/rna Chain: D: PDB Molecule:trna-dihydrouridine synthase; PDBTitle: trna-dihydrouridine synthase from thermus thermophilus in complex with2 trna Resolution 3.51 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.										.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.																												.																.
Query SS confidence																			.	.	.	.	.	.	.	.	.																												.																.
Query Sequence		A	A	I	A	R	E	A	I	L	H	G	A	D	A	V	Y	I	.	.	.	.	.	.	.	.	.	G	G	P	G	F	G	A	R	H	N	A	S	N	S	L	K	D	I	A	E	L	V	P	F	A	H	R	.	Y	G	A	K	I	F	V	T	L	N	T	I	L	H	D	.	D	E	L	E	P	A	Q	R	L	I
Query Conservation																			.	.	.	.	.	.	.	.	.																												.																.
Alig confidence																			.	.	.	.	.	.	.	.	.											.	.																.																.
Template Conservation																																						.	.
Template Sequence		A	E	A	A	R	I	G	E	A	F	G	Y	D	E	I	N	L	N	L	G	C	P	S	E	K	A	Q	E	G	G	Y	G	A	C	L	L	.	.	L	D	L	A	R	V	R	E	I	L	K	A	X	G	E	A	V	R	V	P	V	T	V	K	X	R	L	G	L	E	G	K	E	T	Y	R	G	L	A	Q	S	V
Template Known Secondary structure											T	T		S										S							T		G	G	G	G	G	.	.	G														T	T		S	S								S		B	T	T
Template Predicted Secondary structure																																						.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100																							.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	D	L	Y	Q	T	G	V	D	A	L	I	V	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	G	I	L	E	L	D	I	P	P	I	E	L	H	A	S	T	Q	C	D	I	R	T	V	E	K	A	K	F	L	S	D	V	G	F	T	Q	I	V	L	A	R
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.													.
Template Conservation																																																									.	.													.
Template Sequence		E	A	X	A	E	A	G	V	K	V	F	V	V	H	A	R	S	A	L	L	A	L	S	T	K	A	N	R	E	I	P	P	L	R	H	D	W	V	H	R	L	K	G	D	F	P	Q	L	T	F	V	T	N	G	G	.	.	I	R	S	L	E	E	A	L	F	H	L	K	.	R	V	D	G	V	X	L	G	R
Template Known Secondary structure							T	T									S		B		T	T	S		T	T	G	G	G	T	S	S															T	T	S						S	S	.	.			S									T	.	T	S	S					S
Template Predicted Secondary structure																																																									.	.													.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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