 |
Job Description | P76104 | Confidence | 70.60% | Date | Thu Jan 5 12:18:59 GMT 2012 |
Rank | 343 | Aligned Residues | 87 |
% Identity | 7% | Template | c2yx0A_ |
PDB info |
PDB header:metal binding protein | Chain: A: PDB Molecule:radical sam enzyme; |
PDBTitle: crystal structure of p. horikoshii tyw1
|
Resolution | 2.21 Å |
|
 |
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
|
|
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | S | P | A | R | D | A | A | I | A | R | E | A | I | L | . |
. |
. |
H | G | A | D | A | V | Y | I | G | G | P | G | F | G | A | . |
. |
. |
. |
. |
. |
. |
R | H | N | A | S | N | S | L | K | D | I | A | E | L | V | P | F | A | H | R | Y | G | A | K | I | F | V | T | L | N | T | I | L | H | D | D | E | L | E | P |
Query Conservation |   |
|
|
|
|
|
|   |
|   |
|   |
|
|
|   | . | . | . |   |
|
|
|
|
|
|
|
|   |   |   |
|   |
| . | . | . | . | . | . | . |
|   |   |
|   |
|   |   |
|
|
|   |
|
|
|   |   |
|
|   |   |
|   |
|
|
|
|
|
|
|
|
|   |   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |   |
|   |   |   |   |
|   |
|   |   |   |   |   |   |   |
|   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|   | . |
|
|
|
|
|   |
|   |
|
|
Template Sequence |   |
I | V | T | N | G | T | I | P | E | R | L | E | E | M | I | K | E | D | K | L | P | T | Q | L | Y | V | S | I | T | A | P | D | I | E | T | Y | N | S | V | N | I | P | M | I | P | D | G | W | E | R | I | L | R | F | L | E | L | M | R | D | L | P | T | R | T | V | V | R | L | . |
T | L | V | K | G | E | N | M | H | S |
Template Known Secondary structure |   |
 |  |  |
| S |
|
|  |  |  |  |  |  |  |  |  | T | T |
|
|
| S |  |  |  |  |  |  |
|
| S | S |  |  |  |  |  |  |  |  |
| B | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | S |  |  |  |  |  |  | . |  |  |
| T | T | T | T |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
175 | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | |
. | . | . | . | . | . | 250 | . | . | . |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Q | R | L | I | T | D | L | Y | Q | T | G | V | D | A | L | I | V |
Query Conservation |   |
  |   |   |   |
|   |   |
|   |   |   |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |
|
|   |   |   |   |   |
|
|
|
|
|
Template Sequence |   |
P | E | K | Y | A | K | L | I | L | K | A | R | P | M | F | V | E | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
254 | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|