Job Description P76104 Confidence 96.22% Date Thu Jan 5 12:18:59 GMT 2012 Rank 40 Aligned Residues 125 % Identity 22% Template c2ekcA_ PDB info PDB header:lyase Chain: A: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: structural study of project id aq_1548 from aquifex aeolicus vf5 Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.													.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.												.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.												.
Query Sequence		D	A	A	I	A	R	E	A	I	L	H	G	A	D	A	V	Y	I	G	G	P	.	.	.	.	.	.	.	.	.	.	.	.	G	F	G	A	R	H	N	A	S	N	S	.	L	K	D	I	A	E	L	V	P	F	A	H	R	Y	G	A	K	I	F	V	T	L	N	T	I	L	H	D	D	E	L	E	P	A	Q
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.												.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation
Template Sequence		S	L	K	A	F	K	E	V	L	K	N	G	T	D	I	L	E	I	G	F	P	F	S	D	P	V	A	D	G	P	T	I	Q	V	A	H	E	V	A	L	K	N	G	I	R	F	E	D	V	L	E	L	S	E	T	L	R	K	E	F	P	D	I	P	F	L	L	M	T	Y	Y	N	P	I	F	R	I	G	L	E
Template Known Secondary structure												T	T		S									S			T	T	S														T	T																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		R	L	I	T	D	L	Y	Q	T	G	V	D	A	L	I	V	Q	D	M	G	I	L	E	L	D	I	P	P	I	E	L	H	A	S	T	Q	C	D	I	R	T	V	E	K	A	K	F	L	S	D	V	G	F	T	Q	I	V	L	.	A	R	E	L	N	L	D	Q	I	R	A	I	H	Q	A	T	D
Query Conservation																																																												.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	F	C	R	L	S	R	E	K	G	I	D	G	F	I	V	P	D	L	P	P	E	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	L	K	A	V	M	K	K	Y	V	L	S	F	V	P	L	G	A	P	T	S	T	R	K	R	I	K	L	I	C	E	A	A	D
Template Known Secondary structure										T	T							T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T									T	T														S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.																		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions