Job Description P76104 Confidence 96.06% Date Thu Jan 5 12:18:59 GMT 2012 Rank 45 Aligned Residues 135 % Identity 13% Template c1ydnA_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of the hmg-coa lyase from brucella melitensis,2 northeast structural genomics target lr35. Resolution 2.30 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40							.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.																																		.	.	.	.
Query SS confidence																																							.	.	.	.	.	.																																		.	.	.	.
Query Sequence		S	S	H	R	L	E	L	L	S	P	A	R	D	A	A	I	A	R	E	A	I	L	H	G	A	D	A	V	Y	I	G	G	P	G	F	G	A	.	.	.	.	.	.	R	H	N	A	S	N	S	L	K	D	I	A	E	L	V	P	F	A	H	R	Y	G	A	K	I	F	V	T	L	N	T	I	L	.	.	.	.
Query Conservation																																							.	.	.	.	.	.																																		.	.	.	.
Alig confidence																																							.	.	.	.	.	.																																		.	.	.	.
Template Conservation
Template Sequence		R	A	D	G	V	R	Y	S	V	L	V	P	N	X	K	G	Y	E	A	A	A	A	A	H	A	D	E	I	A	V	F	I	S	A	S	E	G	F	S	K	A	N	I	N	C	T	I	A	E	S	I	E	R	L	S	P	V	I	G	A	A	I	N	D	G	L	A	I	R	G	Y	V	S	C	V	V	E	C	P	Y
Template Known Secondary structure				S	S	S							S	S										T	T		S								S									T	S	S																			T	T										S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
			74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.														.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.
Predicted Secondary structure		.																														.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Query SS confidence		.																														.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Query Sequence		.	H	D	D	E	L	E	P	A	Q	R	L	I	T	D	L	Y	Q	T	G	V	D	A	L	I	V	Q	D	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	I	L	E	L	D	I	P	P	I	E	L	H	A	S	T	Q	C	D	I	R	T	V	E	K	A	K	F	L	S	.	D	V	G	F	T	Q	I
Query Conservation		.																														.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Alig confidence		.																														.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation
Template Sequence		D	G	P	V	T	P	Q	A	V	A	S	V	T	E	Q	L	F	S	L	G	C	H	E	V	S	L	G	D	T	I	G	R	G	T	P	D	T	V	A	A	X	L	D	A	V	L	A	I	A	P	A	H	S	L	A	G	H	Y	H	D	T	G	G	R	A	L	D	N	I	R	V	S	L	E	K	G	L	R	V	F
Template Known Secondary structure		T																			T		S							T	T	S																T	T	S		G	G	G						B		T	T	S													T
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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