Job Description P76104 Confidence 97.25% Date Thu Jan 5 12:18:59 GMT 2012 Rank 15 Aligned Residues 150 % Identity 15% Template c1xuzA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac; PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol Resolution 2.20 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.																						.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	I	A	R	E	A	I	L	H	G	A	D	A	V	Y	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	G	F	G	A	R	H	N	A	S	N	S	L	K	D	I	A	E	L	V	P	F	A	H	R	Y	G	A	K	I	F	V	T	L	N	T	I	L	H	D
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		F	E	M	V	D	A	A	Y	N	A	G	A	E	V	V	K	H	Q	T	H	I	V	E	D	E	M	S	D	E	A	K	Q	V	I	P	G	N	A	D	V	S	I	Y	E	I	M	E	R	C	A	L	N	E	E	D	E	I	K	L	K	E	Y	V	E	S	K	G	M	I	F	I	S	T	P	F	S	.	.	.	.
Template Known Secondary structure												T		S															G	G	G	G	G				T	T		S	S																										T	T									S	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.						.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																									.	.	.	.	.										.																	.	.																		.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.										.																	.	.																		.	.	.	.	.	.	.
Query Sequence		D	E	L	E	P	A	Q	R	L	I	T	D	L	Y	Q	T	G	V	D	A	L	I	V	.	.	.	.	.	Q	D	M	G	I	L	E	L	D	.	I	P	P	I	E	L	H	A	S	T	Q	C	D	I	R	T	.	.	V	E	K	A	K	F	L	S	D	V	G	F	T	Q	I	V	L	.	.	.	.	.	.	.
Query Conservation																									.	.	.	.	.										.																	.	.																		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																		.	.	.	.	.										.																	.	.																		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	R	A	A	A	L	R	L	Q	R	M	D	I	P	A	Y	K	I	G	S	G	E	C	N	N	Y	P	L	I	K	L	V	A	S	F	G	K	P	I	I	L	S	T	G	M	N	S	I	E	S	I	K	K	S	V	E	I	I	R	E	A	G	V	P	Y	A	L	L	H	C	T	N	I	Y	P
Template Known Secondary structure		.	.	.	.	.	.											T		S						G	G	G	T	T										T	T		S							T	T																	T												S	S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
				141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.							.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure		.	.																																				.	.	.	.	.	.
Query SS confidence		.	.																																				.	.	.	.	.	.
Query Sequence		.	.	A	R	E	L	N	L	D	Q	I	R	A	I	H	Q	A	T	D	A	T	I	E	F	F	I	H	G	A	L	C	V	A	Y	S	G	Q	.	.	.	.	.	.	C	Y	I	S	H	A	Q	T	G	R
Query Conservation		.	.																																				.	.	.	.	.	.
Alig confidence		.	.																		.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.
Template Sequence		T	P	Y	E	D	V	R	L	G	G	M	N	D	L	S	E	A	F	P	.	.	.	.	.	.	.	.	.	D	A	I	I	G	L	S	D	H	T	L	D	N	Y	A	C	L	G	A	V	A	L	G	G	S
Template Known Secondary structure									T	T										T	.	.	.	.	.	.	.	.	.	T	S								S	S	S	S										T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.										.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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