Job Description P76104 Confidence 68.21% Date Thu Jan 5 12:18:59 GMT 2012 Rank 353 Aligned Residues 82 % Identity 20% Template c1bf2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:isoamylase; PDBTitle: structure of pseudomonas isoamylase Resolution 2.00 Å

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		15	.	.	.	.	20	.	.	.	.	.	.					.	.	.	30	.	.	.	.	.																																		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	D	A	A	I	A	R	E	A	I	L	H	.	.	.	.	G	A	D	A	V	Y	I	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	F	G	A	R	H	N	A	S	N	S	L	K	D	I	A	E	L	V	P	F
Query Conservation														.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	T	Y	Y	G	A	G	L	K	A	S	Y	L	A	S	L	G	V	T	A	V	E	F	L	P	V	Q	E	T	Q	N	D	A	N	D	V	V	P	N	S	D	A	N	Q	N	Y	W	G	Y	M	T	E	N	Y	F	S	P	D	R	R	Y	A	Y	N	K	A	A	G	G	P	T	A	E	F	Q	A	M	V	Q	A
Template Known Secondary structure		T	S							T								T							S			B		B	S		T	T	T	T	S	S	T	T			T	T				S				B	S		S	S		B		G	G	G		S			S	T	T
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		58	.	60	.	.	.	.	.	.	.	.	.																																																		70	.	.	.	.	.	.	.	.			.	80	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Query Sequence		A	H	R	Y	G	A	K	I	F	V	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	I	L	H	D	D	E	L	.	.	E	P	A	Q	R	L	I	T
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation
Template Sequence		F	H	N	A	G	I	K	V	Y	M	D	V	V	Y	N	H	T	A	E	G	G	T	W	T	S	S	D	P	T	T	A	T	I	Y	S	W	R	G	L	D	N	A	T	Y	Y	E	L	T	S	G	N	Q	Y	F	Y	D	N	T	G	I	G	A	N	F	N	T	Y	N	T	V	A	Q	N	L	I	V	D	S	L	A
Template Known Secondary structure					T	T										S	S		T	T		S	B	S	S	S	S		S	S		B	B		S	S										B		B		T	T	S	S	S	B			S	S	S	S	S			B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		87	.	.	90	.		.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		D	L	Y	Q	T	.	G	V	D	A	L
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		Y	W	A	N	T	M	G	V	D	G	F
Template Known Secondary structure						T	S
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions