 |
Job Description | P77196 | Confidence | 18.72% | Date | Thu Jan 5 12:26:13 GMT 2012 |
Rank | 63 | Aligned Residues | 109 |
% Identity | 11% | Template | c2ww8A_ |
PDB info |
PDB header:cell adhesion | Chain: A: PDB Molecule:cell wall surface anchor family protein; |
PDBTitle: structure of the pilus adhesin (rrga) from streptococcus2 pneumoniae
|
Resolution | 1.90 Å |
|
 |
  |   |
707 | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | |
|
|
. | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | T | N | M | F | G | K | A | V | V | S | D | V | N | N | Y | Y | R | N | Q | A | Y | I | D | L | N | K | L | P | E | N | A | E | A | T | Q | S | V | V | Q | A | T | L | T | E | G | A | I | G | Y | R | K | F | A | V | I | S | G | Q | K | . |
. |
. |
A | M | A | V | L | R | L | Q | D | G | S | H | P | P | F | G | A |
Query Conservation |   |
  |
|
|   |   |
|   |
|
|
|
|   |
|   |
|
|   |   |
|   |
|   |
|
|   |   |   |
|
|   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |   |
|
|
|
|   |   |   |
|   |   |   |   |   |   |   | . | . | . |   |
|   |   |
|   |   |   |   |
|   |   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |   |   |
|   |
|   |   |   |   |   |   |
|   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
F | Y | D | T | N | G | R | T | T | L | H | P | K | E | V | E | Q | N | T | V | R | D | F | P | I | P | K | I | R | D | V | R | K | Y | P | E | I | T | I | S | K | E | K | K | L | G | D | I | E | F | I | K | V | N | K | N | D | K | K | P | L | R | G | A | V | F | S | L | Q | K | Q | H | P | D | Y | P | D | I | Y | G |
Template Known Secondary structure |   |
|  |  | S | B | S | S |
|  |  |  | S | B | T | T |
| T | T |
|
|  |  |
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
| B |
|
|  |  |  |  |  |  |  |  |  | T | T | T |
|
| B |
| S | S |
|  |  |  |  |  |  |  |
| S | S |
| S | S |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
691 | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 |
  |
  |   |
784 | . | . | . | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | V | K | N | D | N | E | Q | T | V | G | L | V | D | D | D | G | S | V | Y | L | A | G | V | K | P | G | E | H | M | S | V | F |
Query Conservation |   |
  |
|   |   |   |   |
|   |   |   |   |   |
|
|   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   | . |   |
|   |
|   |
|   |
Template Sequence |   |
A | I | D | Q | N | G | T | Y | Q | N | V | R | T | G | E | D | G | K | L | T | F | K | N | L | S | . |
D | G | K | Y | R | L | F |
Template Known Secondary structure |   |
| S | S | S | S |
| T | T | S | S |  |  |
|
| T | T |
|  |  |  |  |  |  |  |
| . | S |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
| . |
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
771 | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | . | . | . | |
. | . | . | . | 800 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|