Phyre 2 alignment of P77196 with c2l1tA

Job Description P77196
Confidence 18.12% Date Thu Jan 5 12:26:13 GMT 2012

Rank 64 Aligned Residues 60

% Identity 27% Template c2l1tA_

PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of the n-terminal domain of np_954075.1

Resolution UNK

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	762	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.								.	.	.	.	820	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.
Query Sequence	I	S	G	Q	K	A	M	A	V	L	R	L	Q	D	G	S	H	P	P	F	G	A	E	V	K	N	D	N	E	Q	T	V	G	L	V	D	D	D	G	S	V	Y	L	A	G	V	K	P	G	E	H	M	S	V	.	.	.	.	.	.	.	F	W	S	G	V	A	H	C	D	I	N
Query Conservation																																																							.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.																.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.
Template Sequence	E	Q	L	Q	K	V	N	L	T	V	R	L	G	D	T	G	S	F	D	G	T	A	A	I	T	S	L	K	G	S	L	A	W	L	.	.	.	.	.	E	L	F	G	A	E	Q	P	P	P	N	T	L	S	E	G	A	E	V	S	V	S	V	W	T	G	G	A	L	C	R	C	D
Template Known Secondary structure		T	T										T	T	T														T	T					.	.	.	.	.			S	S	S					T	T	T			T	T										T	T
Template Predicted Secondary structure																																			.	.	.	.	.
Template SS confidence
	14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.						.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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