Job Description P0AEV9 Confidence 81.87% Date Thu Jan 5 11:24:23 GMT 2012 Rank 8 Aligned Residues 54 % Identity 11% Template c3l4bG_ PDB info PDB header:transport protein Chain: G: PDB Molecule:trka k+ channel protien tm1088b; PDBTitle: crystal structure of an octomeric two-subunit trka k+ channel ring2 gating assembly, tm1088a:tm1088b, from thermotoga maritima Resolution 3.45 Å

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Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	D	V	L	L	C	V	G	N	S	M	M	G	D	D	G	A	G	P	L	L	A	E	K	C	A	A	A	P	K	G	N	W	V	V	I	D	G	G	S	A	P	E	N	D	I	V	A	I	R	E	L	R	P	T	R	L	L	I	V	D	A	T	D
Query Conservation
Alig confidence												.	.	.	.	.	.	.															.										.	.	.
Template Conservation												.	.	.	.	.	.	.															.										.	.	.
Template Sequence		M	K	V	I	I	I	G	G	E	T	.	.	.	.	.	.	.	T	A	Y	Y	L	A	R	S	M	L	S	R	K	Y	.	G	V	V	I	I	N	K	D	R	.	.	.	E	L	C	E	E	F	A	K	K	L	K	A	T	I	I	H	G	D	G	S	H
Template Known Secondary structure												.	.	.	.	.	.	.												T	T		.							S			.	.	.										S	S	S					S		T	T	S
Template Predicted Secondary structure												.	.	.	.	.	.	.															.										.	.	.
Template SS confidence
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions