Job Description P0AEV9 Confidence 29.74% Date Thu Jan 5 11:24:23 GMT 2012 Rank 76 Aligned Residues 140 % Identity 15% Template c3fvwA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative nad(p)h-dependent fmn reductase; PDBTitle: crystal structure of the q8dwd8_strmu protein from2 streptococcus mutans. northeast structural genomics3 consortium target smr99. Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.																	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	D	V	L	L	C	V	G	N	S	M	M	G	D	D	G	A	G	P	L	L	A	E	K	C	A	A	A	P	K	G	N	W	V	V	I	D	G	G	S	A	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	I	V	A	I	R	E	L	R	P	T	R	L	L	I	V	D	A	T	D
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation												.	.																																																									.	.
Template Sequence		K	R	I	L	F	I	V	G	S	F	.	.	S	E	G	S	F	N	R	Q	L	A	K	K	A	E	T	I	I	G	D	R	A	Q	V	S	Y	L	S	Y	D	R	V	P	F	F	N	Q	D	L	E	T	S	V	H	P	E	V	A	H	A	R	E	E	V	Q	E	A	.	.	D	A	I	W	I	F	S	P	V	Y
Template Known Secondary structure									S			.	.	S	T	T															T	T	S	S								S	S						G	G	G	T	T	S																.	.	S									B
Template Predicted Secondary structure												.	.																																																									.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.																						.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.																		.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.																		.
Query Sequence		M	G	L	N	P	G	E	I	R	I	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	D	I	A	E	M	F	M	M	T	T	H	N	M	P	L	N	Y	L	I	D	Q	L	K	.	E	D	I	G	E	V	I	F	L	G	I	Q	P	D	I	V	G	.	F	Y	Y
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.																		.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.																		.
Template Conservation
Template Sequence		N	Y	A	I	P	G	P	V	K	N	L	L	D	W	L	S	R	S	L	D	L	S	D	P	T	G	P	S	V	L	Q	D	K	I	V	T	V	S	S	V	A	N	G	A	E	V	F	E	D	Y	R	S	L	L	P	F	I	R	X	H	L	V	D	Q	L	T	G	V	P	I	N	S	E	A	W	S	T	G	I	L
Template Known Secondary structure		T	T	B													T	S		S		S	S		T	T	S			T	T	T	T									S						S										T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	T	Q	P	I	K	D	A	V	E	T	V	Y	Q	R	L	E	G	W	E	G	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	S	A	E	K	L	A	E	L	S	A	Q	A	D	A	L	L	S	A	I	E	N
Template Known Secondary structure																						T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions