Job Description P0AFG6 Confidence 100.00% Date Thu Jan 5 11:26:10 GMT 2012 Rank 4 Aligned Residues 224 % Identity 29% Template c3l60A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:branched-chain alpha-keto acid dehydrogenase; PDBTitle: crystal structure of branched-chain alpha-keto acid2 dehydrogenase subunit e2 from mycobacterium tuberculosis Resolution 2.00 Å

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		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	V	P	M	T	R	L	R	K	R	V	A	E	R	L	L	E	A	K	N	S	T	A	M	L	T	T	F	N	E	V	N	M	K	P	I	M	D	L	R	K	Q	Y	G	E	A	F	E	K	R	H	G	I	R	L	G	F	M	S	F	Y	V	K	A	V	V	E	A	L	K	R	Y	P	E	V	N	A	S	I
Query Conservation
Alig confidence																																																.	.	.	.	.
Template Conservation																																																.	.	.	.	.
Template Sequence		D	V	R	P	V	H	G	V	H	A	R	M	A	E	K	M	T	L	S	H	K	E	I	P	T	A	K	A	S	V	E	V	I	C	A	E	L	L	R	L	R	D	R	F	V	S	.	.	.	.	.	A	A	P	E	I	T	P	F	A	L	T	L	R	L	L	V	I	A	L	K	H	N	V	I	L	N	S	T	W
Template Known Secondary structure																																														T	T	.	.	.	.	.	T		T	T																			G	G	G	S
Template Predicted Secondary structure																																																.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.						.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		257	.	.					260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure					.	.	.	.
Query SS confidence					.	.	.	.
Query Sequence		D	G	D	.	.	.	.	D	V	V	Y	H	N	Y	F	D	V	S	M	A	V	S	T	P	R	G	L	V	T	P	V	L	R	D	V	D	T	L	G	M	A	D	I	E	K	K	I	K	E	L	A	V	K	G	R	D	G	K	L	T	V	E	D	L	T	G	G	N	F	T	I	T	N	G	G	V	F	G	S	L
Query Conservation					.	.	.	.
Alig confidence					.	.	.	.
Template Conservation
Template Sequence		V	D	S	G	E	G	P	Q	V	H	V	H	R	G	V	H	L	G	F	G	A	A	T	E	R	G	L	L	V	P	V	V	T	D	A	Q	D	K	N	T	R	E	L	A	S	R	V	A	E	L	I	T	G	A	R	E	G	T	L	T	P	A	E	L	R	G	S	T	F	T	V	S	N	F	G	A	L	G	V	D
Template Known Secondary structure				T	T	T	S							S	S										T	T								T	T	G	G	G																				T				G	G	G	G	S			S						G	G	G	G	T		S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	T	P	I	I	N	P	P	Q	S	A	I	L	G	M	H	A	I	K	D	R	P	M	A	V	N	G	Q	V	E	I	L	P	M	M	Y	L	A	L	S	Y	D	H	R	L	I	D	G	R	E	S	V	G	F	L	V	T	I	K	E	L	L	E	D	P	T	R	L	L	L	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	V	P	V	I	N	H	P	E	A	A	I	L	G	L	G	A	I	K	P	R	P	V	V	V	G	G	E	V	V	A	R	P	T	M	T	L	T	C	V	F	D	H	R	V	V	D	G	A	Q	V	A	Q	F	M	C	E	L	R	D	L	I	E	S	P	E	T	A	L	L	D	L
Template Known Secondary structure		S							T	T		S																T	T																T	T	T																			S					T	T	T
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions